| Protein: | mAcR-60C-PB |
| Organism: | Drosophila melanogaster |
| Length: | 805 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mAcR-60C-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
383.0 | [0..1] | [805..1] |
|
Region A: Residues: [1-408] |
1 11 21 31 41 51
| | | | | |
1 MEPVMSLALA AHGPPSILEP LFKTVTTSTT TTTTTTTSTT TTTASPAGYS PGYPGTTLLT 60
61 ALFENLTSTA ASGLYDPYSG MYGNQTNGTI GFETKGPRYS LASMVVMGFV AAILSTVTVA 120
121 GNVMVMISFK IDKQLQTISN YFLFSLAIAD FAIGAISMPL FAVTTILGYW PLGPIVCDTW 180
181 LALDYLASNA SVLNLLIISF DRYFSVTRPL TYRAKRTTNR AAVMIGAAWG ISLLLWPPWI 240
241 YSWPYIEGKR TVPKDECYIQ FIETNQYITF GTALAAFYFP VTIMCFLYWR IWRETKKRQK 300
301 DLPNLQAGKK DSSKRSNSSD ENTVVNHASG GLLAFAQVGG NDHDTWRRPR SESSPDAESV 360
361 YMTNMVIDSG YHGMHSRKSS IKSTNTIKKS YTCFGSIKEW CIAWWHSG
|
| Detection Method: |  |
| Confidence: | 54.045757 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [409-636] |
1 11 21 31 41 51
| | | | | |
1 REDSDDFAYE QEEPSDLGYA TPVTIETPLQ SSVSRCTSMN VMRDNYSMGG SVSGVRPPSI 60
61 LLSDVSPTPL PRPPLASISQ LQEMSAVTAS TTANVNTSGN GNGAINNNNN ASHNGNGAVN 120
121 GNGAGNGSGI GLGTTGNATH RDSRTLPVIN RINSRSVSQD SVYTILIRLP SDGASSNAAN 180
181 GGGGGPGAGA AASASLSMQG DCAPSIKMIH EDGPTTTAAA APLASAAA
|
| Detection Method: | |
| Confidence: | 7.69897 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [637-805] |
1 11 21 31 41 51
| | | | | |
1 TRRPLPSRDS EFSLPLGRRM SHAQHDARLL NAKVIPKQLG KAGGGAAGGG VGGAHALMNA 60
61 RNAAKKKKKS QEKRQESKAA KTLSAILLSF IITWTPYNIL VLIKPLTTCS DCIPTELWDF 120
121 FYALCYINST INPMCYALCN ATFRRTYVRI LTCKWHTRNR EGMVRGVYN
|
| Detection Method: | |
| Confidence: | 5.52 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
