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View Structure Prediction Details

Protein: nord-PA
Organism: Drosophila melanogaster
Length: 587 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nord-PA.

Description E-value Query
Range
Subject
Range
gi|18447510 - gi|18447510|gb|AAL68317.1| RE56892p [Drosophila melanogaster]
960.0 [0..1] [587..1]

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Predicted Domain #1
Region A:
Residues: [1-587]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRSTMLPGV ELLLLFLLST SLHAEISHLP MASNRIILDS TELLQNPLIQ DAGVPAARAT  60
   61 PLPPQKCPSL QRYRKMLKDF DDLEDLYVDV PVHIALAERQ RKRFVLNLND STPLTIRFSA 120
  121 PVGRKMYYNQ TGNPLRPAAV APGPGVAVGS LVLPCALRGQ YDLFVLARHS GALKVDALAE 180
  181 HPQHDWPLLN ATHRIAIRTQ NRVRKREMIV KWERSKFDFH VMHYCLVIQR LSMDTPRMIF 240
  241 TNFCQAVSAY TDQQPMTPSC AAGGPLEGIW GAPPQRERRL NPRQNVHIVC TGKRRQQLLR 300
  301 RLLPRSSYHL DLFGIHQGRQ NLTLRLASSQ VNFNRTQPLA LKQQALMQLK IGGQHGKQVY 360
  361 SFKVPQTTRQ LGEPFMRHLL IPCSGSEIRV KLLRQRSEVG KTEAFYSPTY IRQKGVLPGE 420
  421 RYLMRFEPSN DDEALRAQKV MVALSSEALF RDLPELPQNT TVFNVRTRCS RATIAWNGSP 480
  481 DERELSYCII VFNLPQRNRS VVDFTNYCMD FVPKRVMQYR YFEWMTCRER QQSPDNIETE 540
  541 TILNLMPGSS YLVYVTANLS MGKPLPYQAL TLHMASQCLD GSHESFY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.34
Match: 1zlgA
Description: No description for 1zlgA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle