Protein: | gi|24762405, gi|... |
Organism: | Drosophila melanogaster |
Length: | 1201 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24762405, gi|....
Description | E-value | Query Range |
Subject Range |
|
841.0 | [0..1] | [729..1] |
Region A: Residues: [1-638] |
1 11 21 31 41 51 | | | | | | 1 MGQSSKSGSA GVGGVGGGGG VVCPSTAISG CASGTALIQL DATGPGAGGA GESEHERGTW 60 61 TGRFDFLLSL LGYSVGLGNV WRFPYLCYNN GGGAFLIPFT IMLVIAGLPL MFMELSFGQY 120 121 AALGPVAVYR RFCPLFRGLG TGMILVSAIV MLYYNLIIAW TIFYMFASFA PVLPWQNCEP 180 181 AWSTKYCFSY AQADQCEATN GTYYLRTCHN ATSAAENNIT TLALGALKRP PAEEYFNNFV 240 241 LGLSKGIEET GSIKLSLAAC LFLAWTIVFL CLCKGVQSSG KVVYFTALFP YVVLVILFVR 300 301 GVTLPGASTG ILFYLTPDWK QLANAQVWGD AAVQIFFALS PAWGGLITLS SYNKFSNNCY 360 361 NCGTFELSTK SNSRDSLIVA FCNIATSFFA GLVIFSIIGF LAHELNVDVE KVVDQGAGLA 420 421 FIVYPEVVTR LPVSPVWAVL FFVMLLTLGL DSQFALMETV TTAILDRFPN LRQYKIWVVL 480 481 SVAIFGYIGG LGFTTNSGMY WLQLMDKYAA NWSVLLIAIS ECILIAWIYG SQRFLNDIQG 540 541 MIGKRSWFWN FFWGIMWRYI TPATLLFILF FNWVEYKPAK YGHYVYPMWA DAVGWIVGLL 600 601 PVLVIFLVAF QEIWRAPMSL SFRDRIKHLL QPTAEWGP |
Detection Method: | |
Confidence: | 74.69897 |
Match: | 2a65A |
Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [639-700] |
1 11 21 31 41 51 | | | | | | 1 AGRPCVNLHA ERYQSQNYDG VTNTKILIEE EASPKQAANK KDRQLTLDVD VDVECLPLAT 60 61 VG |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [701-914] |
1 11 21 31 41 51 | | | | | | 1 KRPGAPKSMG KQGSSGNLQT NAKNGTHKSP TTEISPSKQP LIPSEKDNKS ANIKVLAAGT 60 61 QSSGRECTTM STFAGGGEKK STKVNLATGA TSAAAPLASS NIATAATVAA ATKSPPAAGV 120 121 APTTLVGIAA TGTTVAAAAN GKATLKTTIS SGAVAATAAG GNKAASVAAA TATVAAGKTP 180 181 AAAMALNVAA SVKVSQTDKT APLKTTISAS VATA |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [915-1201] |
1 11 21 31 41 51 | | | | | | 1 PGGTKASTAP SVATAAVVSV SSGATVPAAA SKAAAPLKAT APPPSLAAVN ATQAAKSTPV 60 61 AAASALVASA PPAKSTSASV AKTNTNAGSK PTATLSTCKS DAPAAAASVG VTNGKVTPSG 120 121 GATSTAQPAV NQKATAAAAA QKSQGATATA TPTKTALNQK TIVPSAGSGK GDVPSSRSTD 180 181 TPPPAKGAAS SNISAKSTKA GKTQANETSP TKSAVKPIKA GSTSPTKAVV SKPGASAAKT 240 241 AAASAATATA TAAGSSSSNK KAATSTAATL GSQAKTKGNA SGAGTKK |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.