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View Structure Prediction Details

Protein: wmd-PA, wmd-PB
Organism: Drosophila melanogaster
Length: 328 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for wmd-PA, wmd-PB.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
420.0 [0..1] [328..1198]

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Predicted Domain #1
Region A:
Residues: [1-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANNLRQIP LTCSGHTRPV VHLDFSDICD AGYFLISACK DGSPMLRHGD TGDWVGTFEG  60
   61 HKGAVWNATL NRNATLAASG AADFTGKVWN AVTGAEIHSF QHKHIVKSVA FDRDSENIVT 120
  121 GSNEKLVRVF NLEQPEAQPE EYAGHTGAIK RALFCRGDKC IISAAEDKTV RLWDRMTGIE 180
  181 VQRLQFNSNP NSLEISSDNH ILTISHGSSI SFWEIDTLKK LKEVKVPTNV ASASLHPDKH 240
  241 VFVCGGEDFK MYKFDYITGN EIESFKGHFG PVHSVKFSPD GELYASGSED GTLRLWQTTV 300
  301 GKTYGLWKCT EPADLGNSIS SPREVQAN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.69897
Match: 2ovpB
Description: No description for 2ovpB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle