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View Structure Prediction Details

Protein: CG3530-PA
Organism: Drosophila melanogaster
Length: 761 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3530-PA.

Description E-value Query
Range
Subject
Range
gi|54636216, gi|... - gi|54636216|gb|EAL25619.1| GA17504 [Drosophila pseudoobscura pseudoobscura], gi|125809241|ref|XP_001...
gi|125809241|ref... - GA17504-PA [Drosophila pseudoobscura], GA17504 [Drosophila pseudoobscura pseudoobscura]
732.0 [0..1] [761..1]

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Predicted Domain #1
Region A:
Residues: [1-629]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDITRFMNKF NEIERQLSPT SALRLSFDNI SPETEEPPDG NKRLWGVPVP PFVSEKVVSW  60
   61 IEEEFNEAPV FYNGNSVLKK VENVRMIDRY NTKNPTVGTL YLTATHLIFV EPDSNKETWI 120
  121 LHMHVASIEK LPLSTTGSPL LIRCKTFLSV TFVIPKDSEC HDVYTSLLKL FQPVSINKLY 180
  181 CFNYQPNKDD FPKNAGWDYF KLEAEFKHML VPNEAWTLCS MNEKYELCDT YPRQIYVPKE 240
  241 ATTLMLISSS RFRSKGRLPV LTYLHNNKAS ICRCSQPLSG FSARCLEDEQ MLEAIRKTNS 300
  301 NTDYMYVVDT RPRINAMANR AAGKGYENEA FYENIKFHFL GIENIHVQRA SLQKVLEACE 360
  361 QKSPTMSAFI NALESSGWLK HIRSILDTSS FIANAVDKGV SVVVHCSDGW DRTAQVCSLA 420
  421 QLMLNPYYRT IKGFQALIEK DWLAFGHKFS ERCGHIQTDA REVSPIFTQF LDCTWQLMSQ 480
  481 RSEAFEFNER FLLILHDHVH SCQFGTFVGN CEKDRLDLKL AERTFSLWGY MANHLNEYIN 540
  541 PLYKPNVDEA IKANLAPQCI KFWRGMYSRF ESGIHPREPL GDVLLDSKEH CNSLEDHVQH 600
  601 LTKRIASFKN YISKSAKKLQ DATSAPGKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 178.0
Match: 1lw3A
Description: Crystal Structure of Myotubularin-related protein 2 complexed with phosphate
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [630-761]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKELSSNEIN DNKYNYDKKL SELSAADDDH PLKASNMSFA SLSLSAEQSS PPQALPEEIN  60
   61 SVAVDWKPMR NVTTCSCSTP FDQFSKKTHC WRCGDIFCER CIDKNVALPG HDSGKPVPVC 120
  121 RGCFRQMQKQ SP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.522879
Match: 1dvpA
Description: Hrs
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle