Protein: | vir-PA |
Organism: | Drosophila melanogaster |
Length: | 1854 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vir-PA.
Description | E-value | Query Range |
Subject Range |
|
1941.0 | [0..1] | [1854..1] |
Region A: Residues: [1-140] |
1 11 21 31 41 51 | | | | | | 1 MADVDDGSEL LFFDTFSHEE VTDINLDLVQ FPKPVFITQV RIIPLGARVQ ADFPGGVRLG 60 61 ATNPSKFDLE FFVNDLGMPA ASAFENLGLL RYNQNDCIHL DCSQEKIVTD GLVLRGWYST 120 121 ITLAIYGIFT NSVTEPIASP |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [141-336] |
1 11 21 31 41 51 | | | | | | 1 TLPCEPVGPE IANLSGEVLL QEDVLKDEWQ EPMQAELLTA HKGNVSDYDP EDMEYGMSRD 60 61 HYHQHAEEQE QREMRRLRRS THSTDHSPPP PRRSHTHSES NDREYIRCSR DKGSRDWSRS 120 121 PEYSSHRSRR KRSERSRSVV DEHKWPRTPP ASIDSPTRPR SPDTMDYEDE DSRSHYKMQS 180 181 SHYRHSSESL HRGERD |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [337-405] |
1 11 21 31 41 51 | | | | | | 1 RDDEDRSCTP QEQFEPILSD DEIIGDDEED DAVDAAAIAE YERELEAAAA AAPPAIDAFE 60 61 PWQKPLLVF |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [406-570] |
1 11 21 31 41 51 | | | | | | 1 EGDMAAHFCK ELETLKLLFK KLVLQTRCEN VNAFSEEHGA SVDEREQFVY LGEQLNNQLG 60 61 YLAQHYKRRN FVLQQFFGND ELHLRQAANV LQIALSFQAA CMQPQPAFKI RHIKLGARMA 120 121 ELLGSSEELF QHLLKEHKFD IFEAVFRLYH EPYMALSIKL QLLKA |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [571-811] |
1 11 21 31 41 51 | | | | | | 1 VYALLDTRMG IEHFMGAKNN GYQMIVEAIK TAKLTRTKYA LQAIIKKLHL WEGLESVQIW 60 61 CRRLFVDRII IPGNRDQMED TVITCQQIEF AFEMLMDALF SSQLSYLQPR RFLPVSKKFE 120 121 VVTDPTAQRS FGNALQSYLG QNSLAESLLV MLANCKELPA TTYLSMLDLM HTLLRSHVGI 180 181 DYFVDDAFPV TQTIVAILLG LDEVPRNPEE KEEKAEKSDA EDKAMEVENE AVEAGGEKPT 240 241 P |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [812-1048] |
1 11 21 31 41 51 | | | | | | 1 PTADEEGKPV AAPISVPAPA AAPQVRPRPI LRPVLPRLAR LGIEMSYKVQ TRYHLDAIAY 60 61 AAAAPEYDAV KLATHMHAIY SQTCDPAGRQ HTVEVLGLNN NLKIFMDLIK KEQRLQTQRQ 120 121 LSSPGTKYKS PVLSYAVDMV DACVRYCEQL DYLIEHGGVI LELAKNHETF EPSVSAVLQE 180 181 MYVYMKPLEA INVFVYDDIM PLVEVIGRSL DYLTTFPGDL IMAMRILRYL SISKPLA |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1049-1228] |
1 11 21 31 41 51 | | | | | | 1 GQKAPPVTEE LKHRFVALQL YAADGVQLCI QIMERLCAYF EQPGAHAPAL MTIQGVHCCQ 60 61 IMLPTLQILR ELLSYAILCR DGTYKDLTAI DHLVKVYYLL YYFPTRCQAG PEVEQCKMEV 120 121 VQTLLAYTQP NEQDEESLHK SLWTLMIREV LKNVDGPAHF IPGLKLLAEL LPLPLPMPQP 180 181 |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1229-1307] |
1 11 21 31 41 51 | | | | | | 1 LCDQLQQQHK QRLITERKLW SAHLHPQSGQ IAKLVEALAP SSFPQLSELL QRVCMQLSDL 60 61 APNMTLLIAK TITELLCNE |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1308-1500] |
1 11 21 31 41 51 | | | | | | 1 YQTSNCIPTT NLERLLRFST RLCAFAPLKS SMLSILSGKF WELFQSLLAL NEFNDVVSNC 60 61 QEAVHRILDS FLDSGISLIS HKSTASPALN LAAALPPKEL IPRIIDAVFS NLTSVEVTHG 120 121 ISILAVRNLV ILTEHDFTFY HLAQLLKQKI TEFQAWMERV ILHNETVEYN ANIESLILLL 180 181 RSLTQIEPPP AMS |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1501-1629] |
1 11 21 31 41 51 | | | | | | 1 AMPHRTLKLG ATELAQLVEF QDIELAKPPV LSRILTVMEK HKAVANEAAL SDLKQLILLQ 60 61 ASKQEILAGT STETPPEAEG EANPSASSCS ASLTVEPYLP QAEGIVTQYE ARPIFTRFCA 120 121 TAENAQLTA |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1630-1854] |
1 11 21 31 41 51 | | | | | | 1 RYWLDPLPIE LIEDMNEPIY ERIACDLTDL ANVCLNPDLN VAGDSKRVMN LSGSPQSNRE 60 61 MTPTAPCFRT RRVEVEPATG RPEKKMFVSS VRGRGFARPP PSRGDLFRSR PPNTSRPPSL 120 121 HVDDFLALET CGAQPTGPTG YNKIPSMLRG SRVGRNRGSR ISAAAAFRQK KMMRIGSPSS 180 181 WAESPGSYRS ASDSHFSSSD SHYSSPHYSG RPRGRGLRSR PSYLR |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.