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View Structure Prediction Details

Protein: Fib-PA
Organism: Drosophila melanogaster
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Fib-PA.

Description E-value Query
Range
Subject
Range
gi|47218782 - gi|47218782|emb|CAG02768.1| unnamed protein product [Tetraodon nigroviridis]
431.0 [0..109] [344..74]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKPGFSPRG GGGGGGGGGG GFRGRGGGGG GGGGGFGGGR GRGGGGDRGG RGGFGGGRGG  60
   61 GGRGGGGGGG RGAFGGRGGG GGRGGGGRGG GGRGGGGRGG GA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.58
Match: 1wckA
Description: Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [103-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGFKGGKTVT IEPHRHEGVF IARGKEDALV TRNFVPGSEV YGEKRISVET NGEKIEYRVW  60
   61 NPFRSKLAAA VLGGVEQIHM PPGSKVLYLG AASGTTVSHV SDVVGPEGLV YAVEFSHRSG 120
  121 RDLINVAKKR TNIIPIIEDA RHPHKYRMLV GMVDTIFADV AQPDQGRIVA LNAQHFLKNG 180
  181 GHFVISIKAS CIDSTAQPEA VFAAEVKKMQ ADKLKPQEQL TLEPYERDHA VVVGVYRPPP 240
  241 KQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 118.0
Match: 2ipxA
Description: No description for 2ipxA was found.

YRC Informatics Platform - Version 3.0
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