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View Structure Prediction Details

Protein: CG4610-PA
Organism: Drosophila melanogaster
Length: 661 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4610-PA.

Description E-value Query
Range
Subject
Range
MNMG_SHEDO - tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG OS=Shewanella denitrificans (strain...
725.0 [0..25] [660..1]

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Predicted Domain #1
Region A:
Residues: [1-455]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQLRNAVVH GWARRIRAPS RSAHSAGADI YDVVVIGGGH AGTEASAAAA RMGSRTLLLT  60
   61 HKLETIGEMS CNPSFGGIGK GHLMREVDAL DGVCARCCDV SGVHYKVLNR RRGPAVWGPR 120
  121 AQIDRQLYKK AVQQELHSTP NLEIRAAAVD NLLIEDEQDT QARRCTGVLL ANGEVVRSRS 180
  181 VVLTTGTFLR AHINIGLEVR PAGRIGDAPA KALGEAIDRL GFRMGRLKTG TPPRIAKDSV 240
  241 DFSQLQRHEG DDPPMPFSFL NKDVWLPAKD QLPCYLTYTT PKVSDIVRDN LHVNRHVTEE 300
  301 ITGPRYCPSI ESKILRFGAK VHQVWLEPEG LDSSLVYPQG ISCTLPHDQQ VELVHAIQGL 360
  361 EKAVVVQPGY GVEYDFIDPR ELYPTLETKR VPGLFFAGQI NGTTGYEEAA AQGIIAGANA 420
  421 AGKTRHSDGR QLTISRTEGY IGVLIDDLTS LGTNE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.0
Match: 2a8xA
Description: Crystal Structure of Lipoamide Dehydrogenase from Mycobacterium tuberculosis
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [456-661]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PYRMFTSRAE FRLSLRPDNA DMRLTQKGYE FGLVSSDRYQ HFQQTEARLQ SAIESLRRLR  60
   61 KHTHYWRQAL NLPKAKASVE KSAFDMLGIP ADNITIEQLI HLHPNELSWL KGERNLAERL 120
  121 KIEALYSFFV DEQQRDVEDV RREERLSIPA DIDYFSKSLS LSNEERQKLT LIQPQTIAAA 180
  181 SRIQGVTPST IVRILKYVKK AELAKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle