YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBpp0309730, Ppc...
Organism: Drosophila melanogaster
Length: 191 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309730, Ppc....

Description E-value Query
Range
Subject
Range
gi|115251643, gi... - gi|126700206|ref|YP_001089103.1| coenzyme A biosynthesis bifunctional protein [Clostridium difficile...
226.0 [0..1] [191..1]

Back

Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPERNVMIA ATGSVATIKL AQLIRELSDE RLPFKFHLKV LITEAAKHFF ELEQIPENVP  60
   61 IYHNRDEWIT WNKRGDPVLH IDLGKWADLL VIAPLSANSL SKMATGICDN IVMCVVRAWD 120
  121 LEKPLLFAPA MNTRMYDHPI TREQIDKLTS WGYKEIPCIS KTLMCGDTGN GAMAEVPTIV 180
  181 EAVLSAFQPI K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.69897
Match: 1e20A
Description: 4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphopantothenoylcysteine decarboxylase activity 3.86093811191169 bayes_pls_golite062009
phosphopantothenate--cysteine ligase activity 2.64345867885176 bayes_pls_golite062009
carboxy-lyase activity 1.79168084682693 bayes_pls_golite062009
catalytic activity 1.51672397362026 bayes_pls_golite062009
carbon-carbon lyase activity 1.03827559540394 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle