YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ASPP-PB
Organism: Drosophila melanogaster
Length: 1069 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASPP-PB.

Description E-value Query
Range
Subject
Range
gi|115926458 - gi|115926458|ref|XP_001180763.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...
499.0 [0..441] [1068..280]

Back

Predicted Domain #1
Region A:
Residues: [1-458]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTCVCRPVS GNLPKMPPAS LMPAHRASAS SASSSTSSTA SLAFVSPTRG VVVTSEPKLN  60
   61 VPSRLTSAEL RAMALRQQQQ IDSQHQLLAT KEQRLRFLKS QEVRSAVASA EGERLRRLRE 120
  121 RVEAQESKLR RLRALRGQVD LQKTYNVTLS NDLDSIRALF SEKEKELSLA VAKVEALTRQ 180
  181 LEELRRDRRC PVNILTAAGN GVGGQSLPPQ ASRELEKLRR ELMYRNQLSL QQDARLHMQR 240
  241 EALQQRQAEL RSTDQRIYEL QTRLQRKKQA NTHHQQQQQQ QQQHQQQQHQ QQHQQTTVQQ 300
  301 QQQQQQQLHV QSAQLLAAAA AATAQQQQQH QQHQQQQQQQ QQQSASNLGK HGGVAALKQQ 360
  361 LLQKQVNQLA AAAAAAAAGR ARGNVAAVEP FIHTPQKSTI TSTASYLSGG MKHAAATANT 420
  421 NQQNQLIQDL THVKLGQNSG FFAGSVPVPV ASSSCESD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.045757
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [459-656]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESKLAKKLLA APAKTEAELR KQAQTEAMDS TTHIYAEVGP KKRDREAAAA AAAAAAAAAA  60
   61 AAQAAAEAAN QAATAAAASA ISPPATANAS KIPKSTTSSS SSASALISKL NQQATAKESQ 120
  121 DQQQSQAKKN EISVTSETLS ERNTQQQLTV HSMPLGAISK SVALAVSNAS KPLQVQVSNV 180
  181 AVPPRKPISS VAPNSVSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [657-726]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSSIPKMITY SPKVNRVAPN VVMTDPRPAL PPKPSKMSPT EQPSPVEANT SGSAGGAGSG  60
   61 AASASTANKT 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [727-999]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTATFGLQSL NINDNLPIKA KPLTIRKQPL FEQPRLKSSQ SSSNGQQKPP LLQLQNQRKS  60
   61 EPSARQPTEN LPDTSPQHSP SSESSADETD RMVAPSITTS QQETSTSATS TTTTVTTSNI 120
  121 KERTGNGKPK LGRRVSFDPL ALLLDASLEG ELELVKKTAM QVANPSAAND EGITALHNAI 180
  181 CAGHIDIVKF LVEFGCDVNA QDSDGWTPLH CAASCNNLSM VKFLVESGAC LFASTLSDHE 240
  241 TPAEKCEEDE EGFDGCSEYL YSIQEKLGIL HNG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.30103
Match: 1ixvA
Description: Crystal Structure Analysis of homolog of oncoprotein gankyrin, an interactor of Rb and CDK4/6
Matching Structure (courtesy of the PDB):

Predicted Domain #5
Region A:
Residues: [1000-1069]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVYAVFSYEA QNGDELSFHV NEPLIVLRKG DDAENEWWWA RNAAGEEGYV PRNLLGLYPR  60
   61 VPPHSPHFSD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.09691
Match: 1ycsB
Description: 53BP2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle