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View Structure Prediction Details

Protein: par-1-PE
Organism: Drosophila melanogaster
Length: 1033 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for par-1-PE.

Description E-value Query
Range
Subject
Range
par-1-PG - The gene par-1 is referred to in FlyBase by the symbol Dmel\par-1 (CG8201, FBgn0260934). It is a pro...
638.0 [0..1] [1031..1]

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Predicted Domain #1
Region A:
Residues: [1-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEATTTTTPD LNRGDATRKS VRLYAARKGA APAPPKLSVA PSSNQNSNHS SNNNNSSSNL  60
   61 PETEKEMELR QTHLANKDLD GATEDDSIVE LRRRDAQATP LPRIAVSALP TLQPHPTPKE 120
  121 RQKPPMPRLL STEDDAGVSF ALGSIEKHIH NVEESFKQQQ QNQQSQSSMD VMKLEIKRKQ 180
  181 SKRYGETENL LRPGISDMSS ENDFQYLGGR RAGELDDSNE LMLSEFQRGS DGRNSIGAYS 240
  241 KNSAAAANGA NAVKAKLART ASDTKNNDTV LAMRATFKQK QHLQDEKQPA VWRPAGTGPT 300
  301 PAARSSSSTT STSGSASRGG SSSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [325-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VVDGVAPSKL TATTISASKR REENLRQFEA LLAQKSSHRH GASGASGTGS NAASSKRRSD  60
   61 RPIVAPIP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [393-740]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PYNSSRAEHV TSSTRHSVDP RSHSGHESRS GTASTHPPVG HHPTSRVPSV VANRSNVYSN  60
   61 NAAQGSPNMQ MRSSAPMRWR ATEEHIGKYK LIKTIGKGNF AKVKLAKHLP TGKEVAIKII 120
  121 DKTQLNPGSL QKLFREVRIM KMLDHPNIVK LFQVIETEKT LYLIMEYASG GEVFDYLVLH 180
  181 GRMKEKEARV KFRQIVSAVQ YCHQKRIIHR DLKAENLLLD SELNIKIADF GFSNEFTPGS 240
  241 KLDTFCGSPP YAAPELFQGK KYDGPEVDVW SLGVILYTLV SGSLPFDGST LRELRERVLR 300
  301 GKYRIPFYMS TDCENLLRKF LVLNPAKRAS LETIMGDKWM NMGFEEDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.154902
Match: 2ozoA
Description: No description for 2ozoA was found.

Predicted Domain #4
Region A:
Residues: [741-823]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKPYIEPKAD LADPKRIEAL VAMGYNRSEI EASLSQVRYD DVFATYLLLG RKSTDPESDG  60
   61 SRSGSSLSLR NISGNDAGAN AGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 104.0
Match: 2qnjA
Description: No description for 2qnjA was found.

Predicted Domain #5
Region A:
Residues: [824-1033]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASVQSPTHRG VHRSISASST KPSRRASSGA ETLRVGPTNA AATVAAATGA VGAVNPSNNY  60
   61 NAAGSAADRA SVGSNFKRQN TIDSATIKEN TARLAAQNQR PASATQKMLT TADTTLNSPA 120
  121 KPRTATKYDP TNGNRTVSGT SGIIPRRSTT LYEKTSSTEK TNVIPAETKA RNNTALEYSG 180
  181 TSGASGDSSH PGRMSFFSKL SSRFSKRPNQ 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle