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View Structure Prediction Details

Protein: betaTub56D-PB
Organism: Drosophila melanogaster
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for betaTub56D-PB.

Description E-value Query
Range
Subject
Range
gi|48095525 - gi|48095525|ref|XP_392313.1| PREDICTED: similar to -Tubulin at 56D CG9277-PB, isoform B [Apis mellif...
593.0 [0..1] [447..1]

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Predicted Domain #1
Region A:
Residues: [1-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREIVHIQAG QCGNQIGAKF WEIISDEHGI DATGAYHGDS DLQLERINVY YNEASGGKYV  60
   61 PRAVLVDLEP GTMDSVRSGP FGQIFRPDNF VFGQSGAGNN WAKGHYTEGA ELVDSVLDVV 120
  121 RKEAESCDCL QGFQLTHSLG GGTGSGMGTL LISKIREEYP DRIMNTYSVV PSPKVSDTVV 180
  181 EPYNATLSVH QLVENTDETY CIDNEALYDI CFRTLKLTTP TYGDLNHLVS LTMSGVTTCL 240
  241 RFPGQLNADL RKLAVNMVPF PRLHFFMPGF APLTSRGSQQ YRALTVPELT QQMFDAKNMM 300
  301 AACDPRHGRY LTVAAIFRGR MSMKEVDEQM LNIQNKNSSY FVEWIPNNVK TAVCDIPPRG 360
  361 LKMSATFIGN STAIQELFKR ISEQFTAMFR RKAFLHWYTG EGMDEMEFTE AESNMNDLVS 420
  421 EYQQYQEATA DEDAEFEEEQ EAEVDEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 164.0
Match: 1ffxB
Description: Tubulin:stathmin-like domain complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle