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View Structure Prediction Details

Protein: Atg7-PA
Organism: Drosophila melanogaster
Length: 684 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Atg7-PA.

Description E-value Query
Range
Subject
Range
ATG7 - ATG7 autophagy related 7 homolog (S. cerevisiae)
595.0 [0..2] [675..6]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTEKEIILQ FAPWESFVSP TFWHKLAELK LDHDRLSDSK RSITGHYTNR NASGCLLEVD  60
   61 YTAYNRMAKP PKFSHSAIGT IYNKNTIEEF KALDKLQLLA DEGKELLADM CSGGALRDPS 120
  121 LLTRFFVLSF ADLKCHSYYY WFAFPCPL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [149-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPTLKLQGAV QKLRDLPNSS SYIMALKALP TESQNFFILY ANVEKNIFEA RSLSSLDDKN  60
   61 VEFCYFGFAD PSEYEHPAWI MRNYAAFLLQ QCPSFVGKPL KFLGLRHNQQ MNIDDSLVWK 120
  121 VIQTEACDLS QSENIKFVGW ELNKNGKMGP RMVCMRDSMD PAKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [313-684]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AENSVNLNLK LMKWRLVPDL NLEIISQTKC LLFGAGTLGC AVARNLLSWG FKHITLLDSG  60
   61 KVGFSNPVRQ NLYTHADAVA GNRMKATTAA QRLKEINPSA ETAGYVLEIP MPGHTIGESL 120
  121 LAQTKEHLKV IEKLVQDHDV IFLLTDSRES RWLPTLLGAA KEKIVINAAL GFDSYLVMRH 180
  181 GTTRKEAGDD GQEIEGLKCI NGDQLGCYFC NDVTAPGNSL KDRTLDQQCT VTRPGVSNIA 240
  241 ASYAVELLVA LLQHPRKELA PAYYAQSGRG RSEETEEKVP EGLLGILPHS IRGMLCNYEN 300
  301 ILPATQKFAQ CIACSAAVLN EYKKEGHAFL FKTFETAKFL EDLTGISEFK RLNSEIIDFD 360
  361 DEEFDMSDSD ED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.154902
Match: 2nvuB
Description: No description for 2nvuB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle