YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|15291345, gi|...
Organism: Drosophila melanogaster
Length: 731 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15291345, gi|....

Description E-value Query
Range
Subject
Range
gi|28573729, gi|... - gi|28573729|ref|NP_788403.1| CG30115, isoform D [Drosophila melanogaster], gi|21627030|gb|AAF57673.2...
1057.0 [0..40] [731..902]

Back

Predicted Domain #1
Region A:
Residues: [1-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSHWCLFFA HNPPPLTPSL IIACEPLNQI FTNGLSLNAD RTPDRSTWKW SLHSGSNSTP  60
   61 TYLERRNACR RSEIRQRNSK FKRKTVANSS SFDSFNESLE QEEESISQAK PSKPLARNNS 120
  121 LDDTALQKLA AAMRYRKRDA AVKEETKTPV KEPCKCDQDA KQDERIEPCS CILRDQRSRS 180
  181 AKSQSPVFSY KALKERSKSV PRIGG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [206-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSLDEEAERE REQDEDSAAS LRGSKPDLSE RKTKGKGFFE VKQYNHKTMP KKIANLKKQR  60
   61 SSTTKSCSRF YMDLSEFDSS SSTVLKITES TEELRPDGEI ELAQEAATLD ESTQDQYYSP 120
  121 DHETELLSPA EKSKRDAQIV LDLLKNSKEF ERIYNKQQKR RESPVSPVSP DISRGPILPP 180
  181 PRPPSRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [393-556]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPPLELEEQE KKPVEEVDSV SEEPIYETLL RNVHVPYKFS PVLGRAKSSQ ILKKRSKTAP  60
   61 AASRPESDYV TLVYSPEGVL QRVGEEVVQR DSCSSSTTST SSNGSGSTLK RDSQSTVINL 120
  121 LMEAAQEHES RPLPKNSVSG SESSLLPRAL KSIDNLSMAF GRSN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [557-731]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPPERRVSDV SEMCRQSVLH RQGSEAVGER MAHVDYADPK ALFGLGVLNH SERDSVFSLT  60
   61 SSSSDSMCEQ QRKRSGVGAT FEYEQQVEDS LENDFRDSAI YSDDNEKRSG DYDVHLRRPS 120
  121 SPPPPPPPLG PRPHQPPQIA PKPSKDQLIQ QRSGVIVCQS ASRSWVLQQI ENFNK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle