YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|7302641, gi|2...
Organism: Drosophila melanogaster
Length: 2280 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7302641, gi|2....

Description E-value Query
Range
Subject
Range
SPBPJ4664.02 - glycoprotein
YHU2_SCHPO - Uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02 OS=Schizosaccharomyces pombe (str...
552.0 [0..3] [2277..637]

Back

Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKLAKVAL NSSNVATESN IKNNKLLANL SAAGAATATT ATTGTATTTT ATTANQALNF  60
   61 NNKTKATANA TAASANNRHN NNNNSSAIKK HTNTKQLAGK SP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ACNSSSSSLS SSSSSNSSES KDTNFEYEDE WNIGGIPELL DDLDADIEKS AHSSGGGNQA  60
   61 TALNAKQANS SSTSSSSSSK GGASSSSSSA AATGSSSSHK SHKTTLHSNL SATSPTTIKF 120
  121 TRQPVAIGGA NSSSSSSAAA APSGGSANVV AKGSSSSSSS TSSSSSGKHH HHHHHHSNSS 180
  181 SSGSSSKGYK SALVAQLNSP SPLNSNSKSL SGSGSGSGNT N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [324-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAAGAGAGST LSSSTFAGFS KGGSLVSSSA GAAAALAAGS GQQGSKFSAG GMSSQTGSGS  60
   61 GGNNTSNSNN SSSGSGGSGS GSSTGNTASG SGNNNSTSAG GPPSSQGGNN GNGSGSSSSS 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [444-598]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSGKSSAKMS IDHQATLDKG LKMKIKRTKP GTKSSEAKHE IVKATDQQQN GALGAGSNNS  60
   61 ANEDGSSGSS STNASSLGST NSSSSASSGS SSSSGSSSSS SKKHLNNASS GSGSSSSGGG 120
  121 SQNNASGHAS GGGSSGSSQS TPQGTKRGSS GHRRE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [599-674]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTKDKNAHSN RMSVDKSAAA ASAAGEKDTP EKCSGTGAGG SPCSCNGDVG APCSHHACIR  60
   61 RAAHMSNSAG NANSSA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [675-889]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTGQSGGSSS MSAVPPGVFT PSAGSPSTGS PSTVVPAAAS LLAATGAASS SASQMASSSA  60
   61 GGVGGSGGGA NAPGPPGKES AGSIKISSHI AAQLAAAAAS NSYSGSGANT NQGQNSNAGG 120
  121 NGGSESKAAA AAQAKLMAPG MISATMHHTI SVPAGTGTGD DDTKSPPAKR VKHEAGASGA 180
  181 GGGKEMVDIC IGTSVGTITE PDCLGPCEPG TSVTL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [890-1019]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGIVWHETEG GVLVVNVTWR GKTYVGTLLD CTRHDWAPPR FCDSPTEELD SRTPKGRGKR  60
   61 GRSAGLTPDL SNFTETRSSI YFSHAQVHSK LRNGATKGRG GATPSTSPTA FLPPRPEKRK 120
  121 SKDEAPSPLN 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1020-2045]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDASDGASVG GIGGAGGVNM VNASGIPISA SGGGLATQPQ SLLNPVTGLN VQISTKKCKT  60
   61 ASPCAISPVL LECPEQDCSK KYKHANGLRY HQSHAHGAGG GASSMDEDSM QAPEDPATPP 120
  121 SPGVASGTGS GASVASSAVP ATAPSAGQGT VAVSPNTPLA NSSNPVTNGN VAPSAPATGS 180
  181 VTIAAPNTTP SVVETQAPLT GPPPVTPPAP TPICAVATPG AEQSVSSVLP LGNLPLTAGP 240
  241 NSATQQQQPP TQQQQPQLLV PGGSAASLQQ QQQQQQPVAG GSITAGISGQ ALSQHQQQLM 300
  301 GGLPAMLSDQ QQQALLQQGA LKAGVLRFGP PDGNPLQQQP GQASVNPQTQ QSPPRPPSHV 360
  361 QDQQTPSAYA QQAGLKTSPG FGSVGVGAAS SKQKKNRKSP GPSDFEGRVS REDVQSPAYS 420
  421 DISDDSTPVA EQEMLDKSVG QAVTAKHIEL MGKKPTEVGV GVPPPPAPNM YVPGMYQFYP 480
  481 AQQQSAPPPQ QQQQQPQYMV QTEPGKPPGL PPALTQAQQQ QQLQPGAPPP TSQPPSHLLG 540
  541 PPGQQSVAAH LADYSGKNKD PPLDLMTKPQ PQPGQPPSQQ QQSGQLSGQE NNGKDVGPPT 600
  601 SQPGSQPPPV NLSAVAGPPP GSLPPGLGGL SALGAAGLGG PGPGKGMPHF YPFNFIPPAY 660
  661 PYNVDPNFGS VSIVASEEAA KLSGHPGLPP SSQAQQLSGI SIKEERLKES PSPHDQPKHM 720
  721 PSQQQMIASK LIKQEPMTKQ EIKQEPNSNP GQQHPPPQQQ PAPQPQQQQP PPPQPQQPHA 780
  781 LHPKDLQALG AYPAIYQRHS INLAVQQARE EELRRYYMFT GRQNSAAAAA AAAAQNAASG 840
  841 GLPPHPGMMH KDEPGMGSAA QQQQQQQQQQ MQIAQQQQQA IQQHHQHLQQ QHQAQQQQQQ 900
  901 QQHQQQQQQQ QQQQQQQQQQ QQQQKLKQSQ AASAGANNKA TNLTKDSPKQ KGGDDDQPLK 960
  961 VKQEGQKPTM ETQGPPPPPT SQYFLHPSYI SPTPFGFDPN HPMYRNVLMS AAGPYNTAPY1020
 1021 HLPIPR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.0
Match: 1y0fB
Description: No description for 1y0fB was found.

Predicted Domain #9
Region A:
Residues: [2046-2133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PYHAPEDLSR NTGTKALDAL HHAASQYYTT HKIHELSERA LKSPTSGSGP VKVSVSSPSI  60
   61 GPPQPGGPTS SGPGSGPVSG VLGPGSGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.045757
Match: 1y0fA
Description: No description for 1y0fA was found.

Predicted Domain #10
Region A:
Residues: [2134-2280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NQQPGSAPGS AGGVPLNLQP PPGGMGPSPG SKPDLSGPKG HGGVTPGSSL DGHKQSMPGG  60
   61 PPPNGPSGNG AVGGVGGAAG NGAAGGGGAG AADSRSPPPQ RHVHTHHHTH VGLGYPMYPA 120
  121 PYGAAVLASQ QAAAVAVINP FPPGPSK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.34
Match: 1wckA
Description: Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle