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View Structure Prediction Details

Protein: grh-PL
Organism: Drosophila melanogaster
Length: 1302 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for grh-PL.

Description E-value Query
Range
Subject
Range
grh-PJ - The gene grainy head is referred to in FlyBase by the symbol Dmel\grh (CG42311, FBgn0259211). It is ...
942.0 [0..1] [1302..1]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSTATTSV ITSNELSLSG HAHGHGHAHQ LHQHTHSRLG VGVGVGILSD ASLSPIQQGS  60
   61 GGHSGGGNTN SSPLAPNGVP LLTTMHRSPD SPQPELATMT NVNVLDLHTD NSKLYDKEAV 120
  121 FIYETPKVVM PADGGGGNNS DEGHAIDARI AAQMGNQAQQ QQQQQQQTEH QPLAKIEFDE 180
  181 NQIIRVVGPN GEQQQIISRE IINGEHHILS RNEAG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [216-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EHILTRIVSD PSKLMPNDNA VATAMYNQAQ KMNNDHGQAV YQTSPLPLDA SVLHYSGGND  60
   61 SNVIKTEADI YEDHKKHAAA AAAAAGGGSI IYTTSDPNGV NVKQLPHLTV PQKLDPDLYQ 120
  121 ADKHIDLIYN DGSKTVIYST TDQKSLEIYS GGDIGSLVSD GQVVVQA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [383-534]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLPYATTTGA GGQPVYIVAD GALPAGVEEH LQSGKLNGQT TPIDVSGLSQ NEIQGFLLGS  60
   61 HPSSSATVST TGVVSTTTIS HHQQQQQQQQ QQQQQQQQQH QQQQQHPGDI VSAAGVGSTG 120
  121 SIVSSAAQQQ QQQQLISIKR EPEDLRKDPK NG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [535-739]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NIAGAATANG PGSVITQKIL HVDAPTASEA DRPSTPSSSI NSTENTESDS QSVSGSESGS  60
   61 PGARTTATLE MYATTGGTQI YLQTSHPSTA SGAGGGAGPA GAAGGGGVSM QAQSPSPGPY 120
  121 ITANDYGMYT ASRLPPGPPP TSTTTFIAEP SYYREYFAPD GQGGYVPAST RSLYGDVDVS 180
  181 VSQPGGVVTY EGRFAGSVPP PATTT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [740-872]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLTSVHHHQQ QQQQQQQHQQ QQQQQQHHQQ QQHHSQDGKS NGGATPLYAK AITAAGLTVD  60
   61 LPSPDSGIGT DAITPRDQTN IQQSFDYTEL CQPGTLIDAN GSIPVSVNSI QQRTAVHGSQ 120
  121 NSPTTSLVDT STN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [873-947]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSTRSRPWHD FGRQNDADKI QIPKIFTNVG FRYHLESPIS SSQRREDDRI TYINKGQFYG  60
   61 ITLEYVHDAE KPIKN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [948-1160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTVKSVIMLM FREEKSPEDE IKAWQFWHSR QHSVKQRILD ADTKNSVGLV GCIEEVSHNA  60
   61 IAVYWNPLES SAKINIAVQC LSTDFSSQKG VKGLPLHVQI DTFEDPRDTA VFHRGYCQIK 120
  121 VFCDKGAERK TRDEERRAAK RKMTATGRKK LDELYHPVTD RSEFYGMQDF AKPPVLFSPA 180
  181 EDMEKSFYGH ETDSPDLKGA SPFLLHGQKV ATP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1161-1302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLKFHNHFPP DMQTDKKDHI LDQNMLTSTP LTDFGPPMKR GRMTPPTSER VMLYVRQENE  60
   61 EVYTPLHVVP PTTIGLLNAI ENKYKISTTS INNIYRTNKK GITAKIDDDM ISFYCNEDIF 120
  121 LLEVQQIEDD LYDVTLTELP NQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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