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View Structure Prediction Details

Protein: CG9013-PA
Organism: Drosophila melanogaster
Length: 155 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9013-PA.

Description E-value Query
Range
Subject
Range
gi|52789283 - gi|52789283|gb|AAH83129.1| Atp6v0c protein [Mus musculus]
178.0 [0..1] [155..42]
gi|109127279 - gi|109127279|ref|XP_001085529.1| PREDICTED: similar to Vacuolar ATP synthase 16 kDa proteolipid subu...
178.0 [0..26] [155..288]
gi|58381684, gi|... - gi|58381684|ref|XP_311406.2| ENSANGP00000025336 [Anopheles gambiae str. PEST], gi|55242897|gb|EAA070...
170.0 [0..1] [155..36]
gi|58261016, gi|... - gi|58261016|ref|XP_567918.1| hydrogen ion transporter [Cryptococcus neoformans var. neoformans JEC21...
167.0 [0..5] [154..29]
gi|49656538, gi|... - gi|50424561|ref|XP_460869.1| hypothetical protein DEHA0F12683g [Debaryomyces hansenii CBS767], gi|49...
gi|49656538 - gi|49656538|emb|CAG89219.1| DEHA2F11638p [Debaryomyces hansenii]
164.0 [0..3] [155..1]
gi|240133937 - gi|240133937|gb|EER33492.1| vacuolar ATP synthase 16 kDa proteolipid subunit [Candida tropicalis MYA...
VATL_CANTR - V-type proton ATPase 16 kDa proteolipid subunit OS=Candida tropicalis GN=VMA3 PE=3 SV=1
gi|241953253, gi... - gi|241953253|ref|XP_002419348.1| vacuolar ATP synthase proteolipid subunit, putative [Candida dublin...
orf19.5886 - CUP5 CGDID:CAL0002461 Assembly 19, Contig19-10236 (56479, 57259) CDS, translated using codon table 1...
gi|238880844 - gi|238880844|gb|EEQ44482.1| vacuolar ATP synthase 16 kDa proteolipid subunit [Candida albicans WO-1]
161.0 [0..3] [155..1]
gi|27694747 - gi|27694747|gb|AAH43805.1| MGC64475 protein [Xenopus laevis]
160.0 [0..7] [155..58]
gi|49067667, gi|... - gi|71003978|ref|XP_756655.1| vacuolar ATP synthase 16 kDa proteolipid subunit [Ustilago maydis 521],...
160.0 [0..4] [155..8]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSLDEPQC ASFFCILGAV CAIVFSTLGA AYGTAKASVG ISSMSIKHPQ LIMKAIVPVV  60
   61 MAGIIAIYGL VIAVLLAGSL SSPYSAYKGF LNLSAGLAVG VSGMGAGIAI GVVGEAGVRA 120
  121 SAQQPKLFVA IILILIFAEV LGLYGLIVAI YLFSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.154902
Match: 2bl2A
Description: The membrane rotor of the V-type ATPase from Enterococcus hirae
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle