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View Structure Prediction Details

Protein: CG8311-PA
Organism: Drosophila melanogaster
Length: 503 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8311-PA.

Description E-value Query
Range
Subject
Range
gi|125807128|ref... - GA20976-PA [Drosophila pseudoobscura], GA20976 [Drosophila pseudoobscura pseudoobscura]
gi|54635449, gi|... - gi|54635449|gb|EAL24852.1| GA20976 [Drosophila pseudoobscura pseudoobscura], gi|125807128|ref|XP_001...
371.0 [0..1] [503..1]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSPETDSEH SETDSVGSST DSQSSGLGAV RHQRRSAQRT DVFSLKAMAP RPNAGPGGWL  60
   61 CLLLPLALTV RLLRHATPAC KDQARMQCLL TVAAGGMALE TLCFFIYAFV KTGILVKCLV 120
  121 SLLPGVATSL SFYLLVDTSL TFAIIVGFVM TSAYQQIYIY TLRGFQRSFT YGEASVFVQG 180
  181 LVLFALSAIH RLGGFFCGGS WPTEEFDTLN MIMVNALFCL LVFCVALVLF 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [231-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTLRKPCRFY LWTVMLLLAV TCMPVTRPLP LLALVQFLLR DQERLAILVF YMLLVV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [287-503]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTCLTVAWQI GSSAKANTRV RKIFHLLIVM VYIPGLIFEC ALLYLATGVA LAAFVVLELL  60
   61 RLLKIPPFAD RLAVAFSTFK DEKDAGELAL TPFCLLIGCS MPIWMTPCPC SGDNTLALLS 120
  121 GILAVGVGDT AASVVGSKLG RNKWGRSSRS LEGTIAFVVS ILMAVWLLEI SGLVAMSQAK 180
  181 WFATIFAALN SALVEAFTDQ VDNLVLPLIF YTIVGLA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 3.823909
Match: PF01148.11
Description: No description for PF01148.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle