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View Structure Prediction Details

Protein: Hmgs-PC, Hmgs-PA...
Organism: Drosophila melanogaster
Length: 465 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Hmgs-PC, Hmgs-PA....

Description E-value Query
Range
Subject
Range
gi|149030530, gi... - gi|54035469|gb|AAH83543.1| 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial) [Rattus ...
401.0 [0..2] [459..47]

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Predicted Domain #1
Region A:
Residues: [1-465]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASHWPENVG IRAIEILFPS QYVDQTELET FDGASAGKYT IGLGQAKMGF CSDREDVNSL  60
   61 CLTVVSRLLE RQHVKHSEIG RLEVGTETIV DKSKSVKSVL MQLFAESGNT DIEGIDTTNA 120
  121 CYGGTAALFN AVNWVESSSW DGRLALAVCA DIAVYAKGAA RPTGGAGAVA MLVGPNAPLI 180
  181 LDRGLRATHM EHAYDFYKPD LSSEYPTVDG KLSIQCYLSA LDTCYRLYRK KFDQQQKDTS 240
  241 KQPASLSTFD AILFHTPFCK LVQKSVGRLS FNDFLLSSEE ERTKQFPDLE RFNTATLEST 300
  301 YFDRDVEKAF MTQSANIFAS KTKKSLLLAN QVGNMYTPSV YSGLVSLLIS GPAQELVGKR 360
  361 IGLFSYGSGL AASMYSISVT QDAAAFEKFV SQLDYVQPLL NSREKVAPEQ FSALMEVREK 420
  421 NNHAAPYTPT GSISALFPGT YYLKDVDALH RRTYERTPTI SNGVH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 108.0
Match: 2p8uA
Description: No description for 2p8uA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle