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View Structure Prediction Details

Protein: CG30467-PA
Organism: Drosophila melanogaster
Length: 521 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG30467-PA.

Description E-value Query
Range
Subject
Range
gi|125810099, gi... - gi|54636531|gb|EAL25934.1| GA15862 [Drosophila pseudoobscura pseudoobscura], gi|125810099|ref|XP_001...
gi|54636531|gb|E... - GA15862-PA [Drosophila pseudoobscura], GA15862 [Drosophila pseudoobscura pseudoobscura]
599.0 [0..1] [521..1]

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Predicted Domain #1
Region A:
Residues: [1-232]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKEEAEPSA SGLAVAAKQN DVPSAENSNH KESDAYASAS ASASSASTTP PPAQEDAEEA  60
   61 ELLERMRGDA VGNTMYSSRF ILKTVMRVGE LLRHSTLDQQ LEDDLCKVWD MSVSPEVVTL 120
  121 LLENGAIDPI MYTLVAGCED VRLYEILIGL LGNMCAQVEC AEILACDRYT LETLFKMTYC 180
  181 MDTAMLIQLM RLFQYIMAHV LSGKEKFAVN WYICFAAFEN SAQNLGRILQ LS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [233-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSDELLVAAL KATNAVLASC ALVEEENANS TLNLKPFAEV FLVPELCEGV NSAFLRLMRD  60
   61 DQTKLTDEEA G

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [304-521]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDNEDAEVPA AHDSDEDADV GYDSCGPKIT CDVEIIQTYL NICTILVQLP EAQASMDVYA  60
   61 PSIVSCLARI LQFLQQPLQL IPLGERQEEY LEDLAHIWSR LKYFYHKEAF LNLLELWYRL 120
  121 KQHIDNYTGG SDPDANEFEE DEEEEDDAPK EQYVENALKL LRLLACMVIK AENSDLQEIG 180
  181 DEKVQLFVSA LKAGKEEAIF SRALECLKDK VAKESGQA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle