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View Structure Prediction Details

Protein: BEAF-32-PA
Organism: Drosophila melanogaster
Length: 283 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BEAF-32-PA.

Description E-value Query
Range
Subject
Range
FBpp0294039, BEA... - The gene Boundary element-associated factor of 32kD is referred to in FlyBase by the symbol Dmel\BEA...
gi|220946326, gi... - gi|220956032|gb|ACL90559.1| BEAF-32-PB [synthetic construct], gi|220946326|gb|ACL85706.1| BEAF-32-PB...
438.0 [0..25] [283..2]
gi|125807968|ref... - GA10120-PA [Drosophila pseudoobscura], GA10120 [Drosophila pseudoobscura pseudoobscura]
gi|125807968, gi... - gi|54635753|gb|EAL25156.1| GA10120 [Drosophila pseudoobscura pseudoobscura], gi|125807968|ref|XP_001...
394.0 [0..1] [283..1]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHVEKKSELR SLLKSGDKRC KLVEPRNTKS CVWRFFNLVQ CDDHIEPYAC CKTCGDLLSY  60
   61 SGKTGTGSLL RHRCLHSSSS NDKTVRITKA KTLREPLRVA KPKIESNVAN YLGEAGALPQ 120
  121 KWEEYEQNDE ISEDIKDIIY SE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.73
Match: 2djrA
Description: No description for 2djrA was found.

Predicted Domain #2
Region A:
Residues: [143-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPLCYSPIHV MDDEGLDQPE KQVTVLTHST SPAGGSSRPI GVGSGVQATV VASTSSSSSS  60
   61 AKQLKNNLET SIERLTAVSE QLSYIIQQNH EELTKDDDYY FALSLVPAMR HLSLSRKMYV 120
  121 RSKIQDILFK ESEDSTLAKD E

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle