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View Structure Prediction Details

Protein: phyl-PA
Organism: Drosophila melanogaster
Length: 400 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for phyl-PA.

Description E-value Query
Range
Subject
Range
gi|1079116, gi|6... - gi|642608|gb|AAA66168.1| ORF, pir||A55647 phyllopod - fruit fly (Drosophila melanogaster)
692.0 [0..1] [400..1]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNQQQQAN PSAAVAAPAA SSEYLKRTCL ICGCHTNQTI NIYEPRSGPN IVQLIQAKFK  60
   61 FQPLNEDKFL CFSCNNWLIN WHSLQAVNSN EAESQSQSPS HMGNSVLQQE RTKLRPVAMV 120
  121 RPTVRVQPQS QPQLQPQVPI NPTPA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 6.920819
Match: PF07776.6
Description: No description for PF07776.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [146-400]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIVYSKRRAS RRSASVSRMS RVLRQCCVES LRRSPKKRNQ QSVFVCLRPQ GQKRSNAICK  60
   61 VECVAPRRKP VERLVKDVAA TATPTPVLNT QSTPTYQRFP QPSVDGKVVA MFRRLGTTLS 120
  121 REEPAAYSAE SNPACSKLPQ IMSPLKEAPR WTRDLDDDEI LLEFDTAISE VLPTARYQVT 180
  181 HEENKENQQA QEMELELEEE EEVDGRAELE VVQEAEAPLE PQSHHKQGNS HQNSHQASIQ 240
  241 LAGLRLPMGL SISLV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle