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View Structure Prediction Details

Protein: Sin1-PA
Organism: Drosophila melanogaster
Length: 569 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sin1-PA.

Description E-value Query
Range
Subject
Range
SIN1_DROPS - Stress-activated map kinase-interacting protein 1 OS=Drosophila pseudoobscura pseudoobscura GN=Sin1 ...
gi|54635701, gi|... - gi|54635701|gb|EAL25104.1| GA10075-PA [Drosophila pseudoobscura], gi|125807826|ref|XP_001360529.1| G...
666.0 [0..1] [568..1]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATYSNQHWL LSHIRNSFIS TDDTGMCETV MLSDDMPKHY LRKFGNSGAG GDHYHWRRAH  60
   61 KTPPTGGGTT PERNTRHPDA PLQEVDFICY PGLDLSDDEE DMSTHSFDIQ MYPEVGAHRF 120
  121 RSNTAQKLEK LDIAKRRAAR IKSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [145-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYQEEVQPPE SDDFFKRKEL PLSKAERVKN EPKANDDDLS DEGVQSQLTE QLAKSPKQAQ  60
   61 NRFIEFARFD GTSQVGMQTK RINVFLNMLP EPDRN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [240-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPLKICVVAT AKIQEVIGFV CYRTSLQYPD VPLKSLQHYA LYMTEDNDDM EDFPPLDNRE  60
   61 PCSKFGFSQL TLAERRPLAP VTRVDYHSQL GSKSMTSVED KTALSDAAVK ALQNISLNGG 120
  121 TSDPGGGGGG GDSPHDNVKE YEKRLL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [386-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NHNDMLEAPM HRTFRLNIID KRFFKSDVTL GISGERIEID QCKNAKFWPQ KKPVSTPIDF  60
   61 VAHCEILERR HLKALLRIWL KSNSSSPSFS TGCTSAPINA SVTTLNAGSG SGGIAHSPSS 120
  121 PGHSSGLFSS SNIRFKHYDF DTDTHTAEQI HNKLNCILEM RSSDLRREFL LQRDRKQEKR 180
  181 QLKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle