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View Structure Prediction Details

Protein: FBpp0311206, mar...
Organism: Drosophila melanogaster
Length: 921 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311206, mar....

Description E-value Query
Range
Subject
Range
gi|70878483 - gi|70878483|gb|EAN91735.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71649745 - gi|71649745|ref|XP_813586.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
411.0 [0..2] [900..761]

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Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRHKELYKE QSLVLSPRNH CQENRDRLQA ARAKKREDCF YQNRIISVSP TPVKIKQLAA  60
   61 AQAALTQENV APKLESPERL DTKPAELLKE SNPKVSRQKL YLQRYMEWKI AKTKEHK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [118-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQDQKRRGAA INVPTVKQSK ALPKSQTFRV PDNLASAKQK EAAPMFQPPK RCSLYMIANP  60
   61 TGKGKAAEPI KPSIPKPTSA AAPPSSNTVA ASSALARHKS AASATKIVPA IRQNNNPVAL 120
  121 ARQKAAARPI PNTTKQTTSV RQPGIEAKKI TTTIPRPTPA TVTKAKTPGI RQQPPVVSTK 180
  181 PRLPEPPAPR TARLPNVLSK PFEKPLGN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [326-531]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAPVTRRANV VKPQPIRGGG GAAAKFKDTA GATSKAASHS IRMKATKIKS QYTRLQDNVR  60
   61 KLPQLKAELL HAATLDIPPL TPLDDIHNPF IDQATSTQCK SNNSSGHLLE AFGDTILLSP 120
  121 VAPVKAEGES SVKRQLLPEG KKEASGPVAK KKFDFTRYSV ANSPAEDSLI LDPQQTTVKE 180
  181 DTGDSTLVPE GTKTPPRRES NGMPNY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [532-744]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSPFVSVSRG KVNSRCEKEK RNSFYLSNEE SPLEVRRAIE SVLYFRLQLE NEITRLQALC  60
   61 AEWEAYSKEN EARLQETGGI DMINVTIGQT RLLTTKKMMQ FSGLIDRCEA GATGKNSQPN 120
  121 DGSEDSKPVQ AEDLEGWWDM LRLQSENVDK RFDNLKRWKA NDWLDPDAVA EEPKQPKPKP 180
  181 KISRNMKIKS KAKPSSNLQQ FLRKAHANMK KTK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [745-921]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VEEPTLEDGL PATSSRHSSP RVIVVRNRRS FSPARTVLRM STGEGRQSIA PNALLKSAIL  60
   61 AAAEQNAAKT PPPKPRTSIL KTPGTTKRQN RGVLFSAKKS VRRFQFTYEE GNISNDETVG 120
  121 ADKLEDCEED MSLEASTESG SLEQNPGRDS NQENEATPRT YTLRNRRVNL RPSSEFM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle