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View Structure Prediction Details

Protein: Nacalpha-PC, Nac...
Organism: Drosophila melanogaster
Length: 217 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Nacalpha-PC, Nac....

Description E-value Query
Range
Subject
Range
gi|73968420 - gi|73968420|ref|XP_531640.2| PREDICTED: similar to nascent polypeptide-associated complex alpha poly...
274.0 [0..9] [216..170]
gi|1632784 - gi|1632784|emb|CAA70166.1| Nascent polypeptide associated complex protein alpha subunit [Drosophila ...
252.0 [0..1] [217..1]
NACAM_MOUSE - Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus GN=Naca P...
249.0 [0..12] [216..1981]
gi|109480121 - gi|109480121|ref|XP_213821.2| PREDICTED: similar to Nascent polypeptide-associated complex alpha sub...
247.0 [0..12] [216..1909]
gi|125811363|ref... - GA21300-PA [Drosophila pseudoobscura], GA21300 [Drosophila pseudoobscura pseudoobscura]
gi|195170352, gi... - gi|195170352|ref|XP_002025977.1| GL10112 [Drosophila persimilis], gi|194110841|gb|EDW32884.1| GL1011...
gi|125811363, gi... - gi|54637031|gb|EAL26434.1| GA21300 [Drosophila pseudoobscura pseudoobscura], gi|125811363|ref|XP_001...
241.0 [0..1] [217..1]
gi|114644223 - gi|114644223|ref|XP_509538.2| PREDICTED: similar to alpha-NAC, muscle-specific form gp220 isoform 5 ...
240.0 [0..12] [216..235]

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Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPELTEIKSE AAPSTSAEAK PEDVRVEDDG SDSDSDGGMP GLEEAVAATT QLGGGATGLP  60
   61 IDLVSKAKQS RGEKKARKIM LKLGLKQIQG VNRVTIRKSK NILFVINNPD VYKNPHSDTY 120
  121 IVFGEAKIED LSQQAQVAAA EKFKAPEAAG AADSVGATTS VAPIAEEDEE DVDDTGVDEK 180
  181 DIELVITQAN TTRAKAIKAL KNNNNDIVNA IMELTML

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.69897
Match: 1tr8A
Description: Crystal Structure of archaeal Nascent Polypeptide-associated Complex (aeNAC)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle