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View Structure Prediction Details

Protein: EndoG-PA
Organism: Drosophila melanogaster
Length: 310 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EndoG-PA.

Description E-value Query
Range
Subject
Range
gi|54635267, gi|... - gi|54635267|gb|EAL24670.1| GA21375-PA [Drosophila pseudoobscura], gi|125806629|ref|XP_001360096.1| G...
328.0 [0..1] [310..160]

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Predicted Domain #1
Region A:
Residues: [1-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPRVGGVL ALGATALGAF YLGTHVERER QHNGSTSGLP RLPGLPTFGT VSAASLIPAQ  60
   61 ENNVSLTATP SRIGQIMKYG FPGLDHVRSH SDYVLSYDRR NRVPHWVFEH LTAESVAKND 120
  121 AVDRSKCDFK QDESIHPFFR SQNTDYRRSG YDRGHMAAAG NHRLHQKHCD ETFYLSNMAP 180
  181 QVGQGFNRDA WNTLEAHVRR LTKTYSNVYV CTGPLYLPHK EDDGKSYVKY EVIGANTVAV 240
  241 PTHFYKVIVG ESADHKLHME SYVMPNQVIS NDTPISVFQV PPESVERSAG LLFFDQINRK 300
  301 QLTTINGKKV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.69897
Match: 1zm8A
Description: Apo Crystal structure of Nuclease A from Anabaena sp.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle