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View Structure Prediction Details

Protein: CG18445-PA, FBpp...
Organism: Drosophila melanogaster
Length: 722 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG18445-PA, FBpp....

Description E-value Query
Range
Subject
Range
gi|54635872, gi|... - gi|54635872|gb|EAL25275.1| GA14938-PA [Drosophila pseudoobscura], gi|125808296|ref|XP_001360700.1| G...
632.0 [0..1] [722..1]

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Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEPPKFIEN DCYNGSRTFT WLADMVGLSV DLVNFLICQI SALFLASLFR SMLHPSKVSS  60
   61 KLRHTFALSI GLAFGYFCFG QQAIHIAGLP AICYIVIRTQ DPRIVQRAVL LVAMSYLLCV 120
  121 HLMRQLYDYG SYALDITGPL MIITQKVTSL AFSIHDGFVR GDEEL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [166-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKAQQYHAIR KMPSALEYFS YVWHFQSILA GPLVFYKDYI EFVEGYNLLS TPPGNGNLDS  60
   61 SKREVVLEP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [235-467]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPTKAVIRKV VGSLVCAFIF MKFVKIYPVK DMKEDDFMNN TSMVYKYWYA MMATTCIRFK  60
   61 YYHAWLLADA ICNNSGLGFT GYDKDGNSKW DLISNINVLS FEFSTNMRDA INNWNCGTNR 120
  121 WLRTLVYERV PQQYGTLLTF ALSAVWHGFY PGYYLTFATG AVVVTAARTG RRLFRHRFQS 180
  181 TQVTRMFYDI LTCLITRVVL GYATFPFVLL EFMGSIKLYL RFYLCLHIIS LVT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [468-722]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IFILPKFIRG ERRLRTSNGN GNVRLSGSGN TKDAVTTSVE STAALTAGND LNEDKEEDKH  60
   61 AQCKVHTPTQ QQPAAGPHKT TVEQPTEQPN NVNLRSRPQQ QQPHLEKKAM PPTCARDAVS 120
  121 VPHDQCEMDQ LSSKLKEKIE AETKNIEEFI DKTVTETVSG IVEFKNDLMR DIEFPKLKLP 180
  181 GSNGAISLDS SNGGGLRKRN ISSVHDNGTD PGHATADLHP PLEENGAAFL KKEIEVINAV 240
  241 VQQAVPAVLS NGHAK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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