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View Structure Prediction Details

Protein: CG1671-PA
Organism: Drosophila melanogaster
Length: 787 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1671-PA.

Description E-value Query
Range
Subject
Range
gi|148658115, gi... - gi|148658115|ref|YP_001278320.1| NB-ARC domain-containing protein [Roseiflexus sp. RS-1], gi|1485702...
733.0 [0..4] [780..722]

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Predicted Domain #1
Region A:
Residues: [1-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAGISEKSY AAEARYTNFY AGGDIAWSPN GHHLYCLNGS AVNQVDVQTS QILNSYGLSS  60
   61 PSADNKRPAE LDNIDVEEDT ITCFGLSQEH LVTAHRSGLL RLWQLDTGKL VKLWKAQHKG 120
  121 PVIRVEFSPC GRLICTSGGA DATLRLWDYS NNSCLGALKD FPGPAWLLVF HPNVLRKEIY 180
  181 AGGSDNTVYA WNYETKTLVH KMRGHLSQVT GLSFKSNASD CNEIVTVSRD KVMIVWQLQE 240
  241 QLESKQLKVL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.045757
Match: 2gnqA
Description: No description for 2gnqA was found.

Predicted Domain #2
Region A:
Residues: [251-589]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLYDELEGVV YADEGQLIIV ASGSGKLQQV DPKSWKIRDI LSQSDFQISR LLHCSELKQL  60
   61 ALVTTEQNIL VYDVETLEPI KHLVGYNDEI LDMCFMGEHD RYLAVATNSK HFKLYDTEHD 120
  121 MNCKLIVGHS DTVMSLAASQ NLLISVGKDC SVRLWRLQHD KDCSLEALTQ QANCHTSTIG 180
  181 CVAMTHNGAT GFASVSQDGS MKVWQLVRSK EDRNSYSFNL RYAALSHDKE VNCVAYAPNN 240
  241 KLIATASQDK TAKVWLAESN TLQGVLRGHT RGVWSVRFSP VDQIVLTSSS DCTLRIWSIS 300
  301 NFSCIKRFDQ ECTILRAEFL DHGKFIISAA SDGLLKLWN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 2qxvA
Description: No description for 2qxvA was found.

Predicted Domain #3
Region A:
Residues: [590-686]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IKTNTCLQSL DEHNDRVWAL AVSARSNRFF YTGGADSKLI RFGDVTQVTR NEALDKRQAA  60
   61 LEQEQTLHSL LHAQKQLHKA FVLALNLDKP KASFDII

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.221849
Match: 2ovpB
Description: No description for 2ovpB was found.

Predicted Domain #4
Region A:
Residues: [687-787]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NHFVRKRDEP GLRQLVDQLN VDQRVALLQH VKAWTTNSRH SQAGNMILKY LIGDALLDPK  60
   61 ARFYYNGNMV EVLTPYVQRH FKRVTELNKD LAFLEFIVKC M

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle