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View Structure Prediction Details

Protein: dap-PA
Organism: Drosophila melanogaster
Length: 245 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dap-PA.

Description E-value Query
Range
Subject
Range
gi|1684911 - gi|1684911|gb|AAB36557.1| cyclin-dependent kinase inhibitor Dacapo [Drosophila melanogaster]
453.0 [0..1] [245..1]
gi|54636759, gi|... - gi|54636759|gb|EAL26162.1| GA14624 [Drosophila pseudoobscura pseudoobscura], gi|125810699|ref|XP_001...
gi|54636759|gb|E... - GA14624-PA [Drosophila pseudoobscura], GA14624 [Drosophila pseudoobscura pseudoobscura]
372.0 [0..1] [245..1]
gi|17016304 - gi|17016304|gb|AAL31703.1| dacapo [Drosophila virilis]
357.0 [0..1] [245..1]
gi|157110440, gi... - gi|157110440|ref|XP_001651102.1| hypothetical protein AaeL_AAEL005580 [Aedes aegypti], gi|108878706|...
109.0 [0..2] [211..1]
gi|110751241 - gi|110751241|ref|XP_001121044.1| PREDICTED: similar to dacapo CG1772-PA, isoform A [Apis mellifera]
71.0 [0..2] [215..1]
gi|1584843, gi|2... - gi|213624930|gb|AAI69443.1| Xicl gene [Xenopus laevis], gi|213623214|gb|AAI69441.1| Xicl gene [Xenop...
56.0 [0..39] [211..33]
gi|47229638 - gi|47229638|emb|CAG06834.1| unnamed protein product [Tetraodon nigroviridis]
52.0 [0..38] [203..40]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSARVLNPV MISEFCKMSS SPAVSRNLAC GRQLNRIKRD LFGSSKSAEG TANKTPFNSE  60
   61 LERHQELATQ KWGFDFRAGC PLAEKSPYIW ERVSFQESSF APEMYTLTRA AHVRPSADAS 120
  121 PSDMDILVNE RSERENFGSN LVNSS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.02
Match: 1jsuC
Description: P27(KIP1) fragment 22-106
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [146-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LESNTDNESC YDSQDESLAM RLSSSSTTST SSIVLRKRQP KITEFMKERK RLAQAPKKLS  60
   61 PAKRMRTSSP SSSATSSSSS SGGFGLGAHF GAMLKRPRHN 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle