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View Structure Prediction Details

Protein: Vang-PA
Organism: Drosophila melanogaster
Length: 581 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Vang-PA.

Description E-value Query
Range
Subject
Range
gi|21464432 - gi|21464432|gb|AAM52019.1| RE54419p [Drosophila melanogaster]
920.0 [0..1] [581..1]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENESVKSEH SGRSRRSRNH NNNGGGGGGG GGGGGGSVNN GYHRERDRSR HSHRSTHSSK  60
   61 SAKGFQRGDM APYQTSVNMT GDGSHDGQEV IEVQIL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQDENWGENT TAVTGNTSEQ SISMEDINNM WHRESDKGFS FACRRYVESS FYFLLGCGAF  60
   61 FSPVAMVVMP YVGFFPSAFD HPEITQTVRT QLLACSEQCK GQLVSLAARL LLLAIGLWAV 120
  121 FMRRTSATMP RIFLYRALVL LLVTICTFAY WLFYIVQVTN GAKIVVETGG DAVDYKSLVG 180
  181 YATNFVDTLL FIHYVAVVLL ELRHQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [302-377]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPCYYIKIIR SPDGVSRSYM LGQLSIQRAA VWVLQHYYVD FPIFNPYLER IPISVSKSQR  60
   61 NKISNSFKYY EVDGVS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [378-581]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSQQQSQSRA VLAANARRRD SSHNERFYEE HEYERRVKKR RARLITAAEE AFTHIKRIHN  60
   61 EPAPALPLDP QEAASAVFPS MARALQKYLR VTRQQPRHTF ESILKHLAHC LKHDLSPRAF 120
  121 LEPYLTESPV MQSEKERRWV QSWSLICDEI VSRPIGNECT FQLIQNDVSL MVTVHKLPHF 180
  181 NLAEEVVDPK SNKFVLKLNS ETSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle