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View Structure Prediction Details

Protein: CG8080-PA
Organism: Drosophila melanogaster
Length: 413 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8080-PA.

Description E-value Query
Range
Subject
Range
gi|195154717, gi... - gi|195154717|ref|XP_002018268.1| GL16853 [Drosophila persimilis], gi|194114064|gb|EDW36107.1| GL1685...
gi|125809433|ref... - GA20809-PA [Drosophila pseudoobscura], GA20809 [Drosophila pseudoobscura pseudoobscura]
gi|54636288, gi|... - gi|54636288|gb|EAL25691.1| GA20809 [Drosophila pseudoobscura pseudoobscura], gi|125809433|ref|XP_001...
344.0 [0..1] [413..1]

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Predicted Domain #1
Region A:
Residues: [1-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKSKQLLQQ FSKEYAKYTP TNFKLKRALV VTKLSRYEFE QLRHPELSPD QLQQKLRDRG  60
   61 TDVEMVLHLH KVHKDFERRV VQSFQDVGCE VKLSSRLEFR SSLSKDVMSW ADVIVPVGGD 120
  121 GTFLLSAGRA SPLFALSQQK TPIVGFNSDP LHSEGRLMLP KHYSDNPADA VSRIKSGDFK 180
  181 WMHRSRVRTT MLGSNGNIPE PTDLFRHTEV KMEQVSTAPE MLDQDMAYKY KAKMKRVLPY 240
  241 LALNEVFIGE HLSARVSHLQ LVLDHQDVVN KTKCSGLCVS TGTGSTSWHT SINRITSRDV 300
  301 DDLLRSLPDG DSKNVMMLRQ NAEEIAQRYN QGLLFAPDDP RLCYSIREQI CVGVWPSPKT 360
  361 FKERDFVQTV FVKSHCIDAN LVIDGSISFP FNDGAKALLE VHPEDALLTI ALD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.522879
Match: 1u0rA
Description: Crystal structure of Mycobacterium tuberculosis NAD kinase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle