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View Structure Prediction Details

Protein: gi|24651961, gi|...
Organism: Drosophila melanogaster
Length: 528 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24651961, gi|....

Description E-value Query
Range
Subject
Range
gi|125809427, gi... - gi|54636285|gb|EAL25688.1| GA20810-PA [Drosophila pseudoobscura], gi|125809427|ref|XP_001361112.1| G...
523.0 [0..6] [527..47]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEPIEGEQE EKPPPSRAKR ITYLVLHVLL HIIFISYFTA ATIIFIFYDK DSKECWPNRG  60
   61 SEATTESIDN STEDDDDDDY DTEETSEKPV PEVK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKLLCQINWC HGYGFLIVLF ILFYILWLYY WVFKPFVGIK LYNNYLEPVI DKWIAFSRQW  60
   61 IVSGVMLAIV LAVVVAYLGF ECRN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [179-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAYKAIGLLG PVCFVLIGFA VSKHHLQVPW RIVTHGLLGQ LLLGILCLRL PFGRSIFQCL  60
   61 GDKVTIFLNY AQHGARFVYG DR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 18.167491
Match: PF01773.11
Description: No description for PF01773.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [261-366]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ICDEYVFAFA ILAVVFFFSV ITSIMYYLGW MQFILNGFGF LLQAMVGTTV CESVNAAGNV  60
   61 FLSMTESPLV IRPYIEILTV SELHAICTSG YATVAGTVLG AYVSFG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 13.552842
Match: PF07670.5
Description: No description for PF07670.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [367-528]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASASFLIAAS VMAAPGSLAF AKLFYPETEE SLTRSDNIKL ESSTDTSILD AAASGAAAAL  60
   61 LIVLGIVSNI IAFLAIVFFL DAVTEWIFEL IGLHNITLLY ILSQIFIPIV FVMGVPWHDC 120
  121 QAIGLVVAQK SFINEFVAYR NLGILVSDKK VDVSTHLHIL FL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 16.431798
Match: PF07662.4
Description: No description for PF07662.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle