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View Structure Prediction Details

Protein: CG14749-PA
Organism: Drosophila melanogaster
Length: 677 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG14749-PA.

Description E-value Query
Range
Subject
Range
gi|58374870, gi|... - gi|58394120|ref|XP_320531.2| ENSANGP00000015666 [Anopheles gambiae str. PEST], gi|58374870|ref|XP_30...
333.0 [0..374] [677..7]

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Predicted Domain #1
Region A:
Residues: [1-439]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDMMRAMDC LNMAATLRNA ALASATCTGR TLGEDREPIW VEGSRKTPEP PLPEESPAPE  60
   61 PNNEIPLLPK IDFEPNISCF PDLQAINASI VRRELEEEGK RCVRQQLKAI RDKQDAMRLS 120
  121 RETQQRKEER QRDQLQQKAL RERNESLLIQ KADQMTAAQL EAQQREQLAL RQQIDQKLHK 180
  181 LALEGVSRCQ RRFNQKYEGI AKILLSLNPE TVKVCAAQNT QLKELGQKFE QLVSSVKMGN 240
  241 CEMQSQFLCS IIKAEEFCKS LDALELDIIK QLAEFSEQIQ QQLKMEAAKK LEDERQRQQQ 300
  301 QEEERQKLEE QQKLEEQEKL RKEKEESAAK EKQQEAETAK ADAANVPAPL EPKSQDVPPA 360
  361 ATATSTSVHP DRLKFYNDIL ALYQSKVDAV KPLQTEESLK QYRTGCQRAI NLPLNAISAV 420
  421 SPQHLAQNFD KLYSFFAGQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.221849
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [440-677]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTKVMNGTIT INDHPLARDY CMLLMAKKFV SQTETAICSN PQAAFPFASV IITFWKLLPD  60
   61 FGKVFLAYMY KESPFLVPYV IPQQQGQTPE QYLKTIGYRL TDKNELEKPD IYLKRQTGLA 120
  121 RLYAAVIISQ GRKAAGPDEC FELNEGWLWL AHMVHVKPLP DISATLIMEI LQTLGFELWR 180
  181 TYGKQFVKLL VYIQNIYMPQ LAAYDEGGPK TRLEMLLAKF LRERQIAQAV GVLPPGFW

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle