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View Structure Prediction Details

Protein: Odc1-PA
Organism: Drosophila melanogaster
Length: 394 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Odc1-PA.

Description E-value Query
Range
Subject
Range
gi|83643199, gi|... - gi|83643199|ref|YP_431634.1| diaminopimelate decarboxylase [Hahella chejuensis KCTC 2396], gi|836312...
358.0 [0..6] [393..2]

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Predicted Domain #1
Region A:
Residues: [1-394]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAATPEIQF YERELNIRRV IEECDLQRLD QALNICDLSS VERKLRLWQK LLPRIKPFYA  60
   61 VKCNDDPMVV RLLAQLGAGF DCASKNEVKL VLGFDVSPER IIFANPCRPV SHLEYAKEHQ 120
  121 VSNGTVDNEF EVYKLHTHYP NSNLIVRFKS EAKEAQCPLG DKFGCDADVD AAALMLLAKS 180
  181 LELKVTGTSF HVGSGCSELQ AYDRAIKKAK NLFKFGALLG YDMDFLDIGG GFPGSDDVKF 240
  241 EKIAESVNTS VQRHFPDERV HIIAEPGRFF VAAACTLVCK IHAKREIRNE AGKLDTVMYY 300
  301 LNDGVYGSFN CILYDHQVVI AEHYLDNAES LPHLKSLIWG PSCDALDKIS EDLHLPNLNR 360
  361 GDLLGFRNMG AYTMPIASAF NGFEVPKTLY FQAI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.0
Match: 2oo0A
Description: No description for 2oo0A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle