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View Structure Prediction Details

Protein: l(2)01289-PB
Organism: Drosophila melanogaster
Length: 1703 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for l(2)01289-PB.

Description E-value Query
Range
Subject
Range
gi|91076912 - gi|91076912|ref|XP_975074.1| PREDICTED: similar to lethal (2) 01289 CG9432-PB [Tribolium castaneum]
1034.0 [0..41] [1703..16]

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Predicted Domain #1
Region A:
Residues: [1-377]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFTRLKTLS LLVCALLALS FPGHVSGAGN NNNKKGSQPV APPEPEAVIE EVNAKQLEKL  60
   61 LADKDYVAVF WYARSCVTCD KVLAELEKID DDTDSFGVDF VKINDKRLAK QYGIKNFPAL 120
  121 TYFREKEPII YDGDLMDEEG VLDFLTSLEA MDLPDRIEEV NAKILQKIIE DTDFVAVLFC 180
  181 PDHETCPPRV MDKQQCRKCA KALQELENID DEADQLGIGF VKIHDEALAD EYNLGNLPAL 240
  241 VYYRHQTPII YEGELQREED VLEWLVQNKS TGDEDDVIED VTSKTLSTLI SNIDNLVVLF 300
  301 YDHGNDDSMT VLEELEQIDD DCDKHGIQFV KIDDAKAAAD YGIDSIPAIV YFEKEIPNVY 360
  361 DGDLMDEEQI LKWLLGQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.0
Match: 1a8yA
Description: CRYSTAL STRUCTURE OF CALSEQUESTRIN FROM RABBIT SKELETAL MUSCLE SARCOPLASMIC RETICULUM AT 2.4 A RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [378-484]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LERDEIEDVT DEMLDTMIKE GRVIAVLFYD NNDKKSQKVL EELENIDDEC DALGITFVKI  60
   61 DNPEEAVEYG INKVPKLIYF EKGIPTIYEG NLEDEEKLLK WLTDQTS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 1ti3A
Description: Solution structure of the Thioredoxin h1 from poplar, a CPPC active site variant
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [485-807]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDQIEDITDE MLDLIIEKMP HVAVLFYDKD QKKSQKILAE LENIDDECDQ NDIAFVKIDD  60
   61 DKEAKEWGID EIPSIVLFER GIPHIYEGDL MKEDELLGWL VHQKRYSEIP EVTDEMKDKL 120
  121 VENTEHLAVI FYDKDDKQDM RILNELENID DELEKEGIVI VRIDNAAEAK EYGLDHLPAL 180
  181 IYFENKIPAL YEGDLMNEDE VLEWLLVQKK TATIEEVTDE ILVTLINEHE YVVVFFTGPC 240
  241 EPGETCEHTL NALESIDDEL DEAGIIFVTT EDTGIAKKYN VKTYPRLVFF RNRDPLHFTG 300
  301 DLDDEDEVLA WITDDETLEI PGK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 6.29
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [808-1232]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IEEVNVKMLD KILAENDHVV VFFYAEGDKK AQKILNELEN IDDECEEKDI DFVKTSDDDI  60
   61 DKEYDLPGLP ALAFYRHKFR TIYTGDLMKE EEILEWVIDL HESTADVIES VDRKTLQVLI 120
  121 NDVEHLAVFF YDDECESCSD ILEELENIDD DTDKHGIQFV KSNDVKLAHE IGIFAFPALV 180
  181 YYETGVPIMY DGNIASNQDV FNWILEQKAD QSIQLINRDQ LFEYIGTKDF LAVVFYKEDD 240
  241 PDSPRVLRHI ELIDDEAAEY GIYIVKMHDK LMAKKYGFRN PPGLTYFRKG KYINYDGDID 300
  301 DEEEVLDWLT SPANMEMTDH IEQVNRKMFE KIRKNSDYVA VIFYSDECKQ CPRVLAEVEH 360
  361 IDDEADKAGI DFVKIDDKQM AKEYGVFALP AIVFFKPTSK EPVIYAGDLY EEEQILTWLI 420
  421 TQKDP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.522879
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

Predicted Domain #5
Region A:
Residues: [1233-1453]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGDVIEDLEG ERLVHLIEES GSIAVYFYAD GCEQCTKVLE ELENIDDDCD KHGITFVKTR  60
   61 DFSVADGYGV HEYPALVYFE GGIPNVFEGE LSEEEEVLQW LITQKTEDRI ELITRQMLET 120
  121 MVEETQYLAV YFYKINCNIC DQILEGLELI DDECDVFGIH MVKIQDPQLA KRYSIKTFPA 180
  181 LVYFRNGNPL LFEGDLQNEQ SVLEWLIDDD NRELADEIEE V

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.0
Match: 1j08A
Description: Protein disulfide isomerase, PDI
Matching Structure (courtesy of the PDB):

Predicted Domain #6
Region A:
Residues: [1454-1546]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NERMLDRLMA ESTLLVVFFY DDDCAECEEI LEELEEIDGE ADMFGIDFVK IASIQAAKKY  60
   61 EIVNIPSLVY FRKQVPVLYD GDLHQHDKVI TWL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.221849
Match: 1ewxA
Description: Tryparedoxin I
Matching Structure (courtesy of the PDB):

Predicted Domain #7
Region A:
Residues: [1547-1703]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSQDVFEIKN EIEEVNRKML DKLLEENEFL AVFFYEHNQP DSTAALEKLE NIDSETDNLD  60
   61 ITFVKMADSR YAKKWGVTKL PAMVYFRRRF PSIYRGDLLS EDEVLEWLRK NRFRQPELNI 120
  121 FMYALIALAV AFVVYTAFLL QCFKPAPPPP VQHPKQS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 2trcP
Description: Phosducin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle