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View Structure Prediction Details

Protein: PNGase-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 631 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PNGase-PA, FBpp0....

Description E-value Query
Range
Subject
Range
PNGase-PB - The gene PNGase is referred to in FlyBase by the symbol Dmel\PNGase (CG7865, FBgn0033050). It is a p...
648.0 [0..1] [631..8]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDINLECVH QIEPKTRSAG QQQQERGLKE AYLEAVRILL VLLENILAQP ENSMFRTIRQ  60
   61 ENKAIKEKLL SLPGCERLLE AIGFVRAPSS NAYTLPTEVS LQQVKKYRDA LSERRTAWLN 120
  121 G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.39794
Match: 2ccqA
Description: No description for 2ccqA was found.

Predicted Domain #2
Region A:
Residues: [122-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVSKSPPQQS TTSTTPLFIK PSVEYRHRIA FPRVLRTNNN FLQSLELYSD AVMQYEDNLL  60
   61 LATGRTLIPV EELTEMASEK LIDIQDQIAS GERQEKEPCV RDLLLVELVN WFNTQFFQWV 120
  121 NNIPCRVCGS EESRLRRTER EGDIRVEVTV CCGQESKFYR YNDISQLLVS RKGRCGEYAN 180
  181 CFTFLCRALD YDARIVHSHF DHVWTEVYSE AQMRWLHVDP SENVIDSPLM YQHGWKRHID 240
  241 YILAYSRDDI QDVTWRYTND HQKILHLRKL CGEKEMVQTL DAIRAKRRQN CTADRKLFLS 300
  301 QRNMYEVIGL TLERKPTENE LKGRSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.69897
Match: 2f4mA
Description: The Mouse PNGase-HR23 Complex Reveals a Complete Remodulation of the Protein-Protein Interface Compared to its Yeast Orthologs
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [448-631]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSLSWRQSRG EHTFTNIFVF NLSATELQKR QLNVRYSCAT DTYERYAKEG EHITILDSYK  60
   61 TWQKAQFSSK NIFRKVERDW KMAYLARLED TDCGEIAWTF DFSKTNLKVK SYNLVFETKT 120
  121 FGDGKISVTV DATDGSASVE NATGFKIVAK LTGGKGDVAW QHTQLFRQSL NSRDYPFDLQ 180
  181 VQLH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.154902
Match: 2g9gA
Description: No description for 2g9gA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle