YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG1298-PA
Organism: Drosophila melanogaster
Length: 264 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1298-PA.

Description E-value Query
Range
Subject
Range
gi|54635239, gi|... - gi|54635239|gb|EAL24642.1| GA11952 [Drosophila pseudoobscura pseudoobscura], gi|125806563|ref|XP_001...
gi|125806563|ref... - GA11952-PA [Drosophila pseudoobscura], GA11952 [Drosophila pseudoobscura pseudoobscura]
215.0 [0..1] [264..1]

Back

Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGASNRILQV ALCASVFSLI CFVIAFSTPY WLVTDGRLQN PRFTNLGLWE VCFNNFQDIH  60
   61 RFFDNSFNGC LWVFEEEYYI IHDFLLPGFY ISVQLFATLC FVMCLVVIPL TVAFLRTSRD 120
  121 DDRYMVLLLA IGSCQVVGSV FGFIAVVIFG AKGDSRDWMP GWQNNDMGWS FALGVVGAVL 180
  181 LLPSGVLYLV EARRERYKRL NEISNREISE YGDEYYQNQG PSAVLPTAPS PYQSYFASEP 240
  241 SRPRRPQQSS ASNSAVQGGI QTDI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 1qleC
Description: Bacterial aa3 type cytochrome c oxidase subunit III
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle