YRC Public Data Repository - Protein Structure Prediction

Protein:	CAH1-PA
Organism:	Drosophila melanogaster
Length:	270 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAH1-PA.

Description	E-value	Query Range	Subject Range
gi\|22252956 - gi\|22252956\|gb\|AAM94169.1\| erythrocyte carbonic anhydrase [Lepisosteus osseus]	348.0	[0..1]	[268..1]
gi\|35505160, gi\|... - gi\|40363537\|ref\|NP_954685.1\| carbonic anhydrase II [Danio rerio], gi\|35505160\|gb\|AAH57412.1\| Carboni...	346.0	[0..1]	[268..1]
CAH2_TRIHK - Carbonic anhydrase 2 OS=Tribolodon hakonensis GN=ca2 PE=2 SV=3	345.0	[0..1]	[268..1]
gi\|66803883 - gi\|66803883\|gb\|AAY56646.1\| carbonic anhydrase 1 [Drosophila simulans]	340.0	[0..1]	[270..1]
gi\|73762632 - gi\|73762632\|gb\|AAZ83743.1\| carbonic anhydrase [Cyprinus carpio]	337.0	[0..1]	[268..1]
gi\|125984962, gi... - gi\|54644567\|gb\|EAL33308.1\| GA20608 [Drosophila pseudoobscura pseudoobscura], gi\|125984962\|ref\|XP_001... gi\|195164724, gi... - gi\|195164724\|ref\|XP_002023196.1\| GL21230 [Drosophila persimilis], gi\|194105281\|gb\|EDW27324.1\| GL2123... gi\|54644567\|gb\|E... - GA20608-PA [Drosophila pseudoobscura], GA20608 [Drosophila pseudoobscura pseudoobscura]	336.0	[0..1]	[270..1]
gi\|218931238, gi... - gi\|61506858\|dbj\|BAD36835.2\| carbonic anhydrase 1 [Oncorhynchus mykiss], dbj\|BAD36836.1\| carbonic anh...	336.0	[0..1]	[268..1]
gi\|109128866 - gi\|109128866\|ref\|XP_001085299.1\| PREDICTED: carbonic anhydrase VII [Macaca mulatta]	336.0	[0..3]	[269..87]
gi\|60831506 - gi\|60831506\|gb\|AAX36973.1\| carbonic anhydrase II [synthetic construct]	336.0	[0..1]	[268..1]

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Predicted Domain #1

Region A:
Residues: [1-270]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHHWGYTEE NGPAHWAKEY PQASGHRQSP VDITPSSAKK GSELNVAPLK WKYVPEHTKS  60
   61 LVNPGYCWRV DVNGADSELT GGPLGDQIFK LEQFHCHWGC TDSKGSEHTV DGVSYSGELH 120
  121 LVHWNTTKYK SFGEAAAAPD GLAVLGVFLK AGNHHAELDK VTSLLQFVLH KGDRVTLPQG 180
  181 CDPGQLLPDV HTYWTYEGSL TTPPCSESVI WIVFKTPIEV SDDQLNAMRN LNAYDVKEEC 240
  241 PCNEFNGKVI NNFRPPLPLG KRELREIGGH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	92.30103
Match:	2nwyA
Description:	No description for 2nwyA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits