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View Structure Prediction Details

Protein: FBpp0310419, aust-PA
Organism: Drosophila melanogaster
Length: 216 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310419, aust-PA.

Description E-value Query
Range
Subject
Range
gi|58377124, gi|... - gi|58377124|ref|XP_309425.2| ENSANGP00000011205 [Anopheles gambiae str. PEST], gi|55244745|gb|EAA051...
259.0 [0..15] [209..120]
gi|125984157|ref... - GA18196-PA [Drosophila pseudoobscura], GA18196 [Drosophila pseudoobscura pseudoobscura]
gi|125984157, gi... - gi|54644160|gb|EAL32902.1| GA18196 [Drosophila pseudoobscura pseudoobscura], gi|125984157|ref|XP_001...
157.0 [0..77] [212..171]
borr-PB - The gene borealin-related is referred to in FlyBase by the symbol Dmel\borr (CG4454, FBgn0032105). I...
gi|220952188 - gi|220952188|gb|ACL88637.1| borr-PB [synthetic construct]
152.0 [0..101] [210..196]
gi|157129058, gi... - gi|157129058|ref|XP_001655256.1| hypothetical protein AaeL_AAEL011321 [Aedes aegypti], gi|108872377|...
141.0 [0..6] [208..104]
gi|110762041 - gi|110762041|ref|XP_001120534.1| PREDICTED: similar to embryonic stem cell-related [Apis mellifera]
66.0 [0..85] [207..138]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRTKITARR QAQRQKADRE EKVRLSQIKM DSALEKIDEM SKRYKQEVDN QIKVIRGRTD  60
   61 KQLLQMKMPE FLALGFKTFA EFQRAAIKPP T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.678 a.39.1 EF-hand
View Download 0.528 a.60.1 SAM/Pointed domain
View Download 0.521 e.20.1 Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment
View Download 0.463 f.17.1 F1F0 ATP synthase subunit C
View Download 0.398 a.60.6 DNA polymerase beta, N-terminal domain-like

Predicted Domain #2
Region A:
Residues: [92-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRSLSISRGR TRTPQNALPP RLQAHSVDRA LSGDTMSFVR WPRAGEMVLS KAGSPLAVQM  60
   61 RPDRYADVHI PTRGGVITVK PHKINTVKRE VLMQLDENTL NQVKTLNANL GLIVDMANKL 120
  121 GKLKP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.436 N/A N/A d.233.1 Inhibitor of vertebrate lysozyme, Ivy
View Download 0.429 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.428 N/A N/A a.74.1 Cyclin-like
View Download 0.426 N/A N/A f.14.1 Voltage-gated potassium channels
View Download 0.425 N/A N/A a.22.1 Histone-fold


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle