YRC Public Data Repository - Protein Structure Prediction

Protein:	Peritrophin-15b-...
Organism:	Drosophila melanogaster
Length:	93 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Peritrophin-15b-....

Description	E-value	Query Range	Subject Range
gi\|24266649 - gi\|24266649\|gb\|AAN52277.1\|AF468866_1 Pro2 [Glossina morsitans morsitans]	121.0	[0..1]	[90..1]
gi\|12657851 - gi\|12657851\|gb\|AAK01057.1\|AF327453_1 peritrophin-15 precursor [Chrysomya bezziana]	120.0	[0..1]	[91..1]
CG14645-PA - This gene is referred to in FlyBase by the symbol Dmel\CG14645 (CG14645, FBgn0040687). It is a prote...	116.0	[0..6]	[92..3]
gi\|33328977 - gi\|33328977\|gb\|AAQ09895.1\| CG14645 [Drosophila yakuba]	109.0	[0..6]	[92..1]
gi\|125987331, gi... - gi\|54645759\|gb\|EAL34497.1\| GA16549-PA [Drosophila pseudoobscura], gi\|125987331\|ref\|XP_001357428.1\| G...	103.0	[0..4]	[88..1]
gi\|12657853 - gi\|12657853\|gb\|AAK01058.1\|AF327454_1 peritrophin-15 [Lucilia cuprina]	99.0	[0..23]	[90..1]
gi\|116132489, gi... - gi\|118778655\|ref\|XP_308779.3\| AGAP006991-PA [Anopheles gambiae str. PEST], gi\|116132489\|gb\|EAA04414.... AGAP006991-PA - \|protein_coding\|2L:40497066:40497432:-1\|gene:AGAP006991	99.0	[0..20]	[92..22]

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Predicted Domain #1

Region A:
Residues: [1-93]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAALVLLFL TLCVAIYADL DCNPDGNGEP DCVGRSGEIS RDFWDPTHYW QCSSTGQAEL  60
   61 VACEQNTGFD PKTGSCVDWS VWQWYPPCSE AST

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.76
Match:	1dqcA
Description:	Tachycitin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
polysaccharide binding	0.344277505012866	bayes_pls_golite062009
pattern binding	0.322636448989813	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: