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View Structure Prediction Details

Protein: GNAS3_RAT
Organism: Rattus norvegicus
Length: 256 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GNAS3_RAT.

Description E-value Query
Range
Subject
Range
PRP2_MEDTR - Repetitive proline-rich cell wall protein 2 OS=Medicago truncatula GN=PRP2 PE=2 SV=1
141.0 [0..16] [255..106]
gi|70878483 - gi|70878483|gb|EAN91735.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71649745 - gi|71649745|ref|XP_813586.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
140.0 [0..6] [255..758]
gi|8163670 - gi|8163670|gb|AAF73793.1|AF154024_1 surface protein PspC [Streptococcus pneumoniae]
137.0 [0..7] [254..143]
gi|82581111 - gi|82581111|emb|CAJ43592.1| proline-rich protein precursor [Phaseolus vulgaris]
135.0 [0..18] [254..25]
gi|8096255 - gi|8096255|dbj|BAA96106.1| TrPRP2 [Trifolium repens]
132.0 [0..18] [255..23]

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Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRRSRAHQW RRARHNYNDL CPPIGRRAAT ALLWLSCSIA LLRALASSNA RAQQRAAQRR  60
   61 SFLNAHHRSA AAAAAAQVLP ESSESESDHE HEEAEPELAR PECLEYDQDD YETETDSETE 120
  121 PESDIQSETE FETEP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.853872
Match: PF06390.3
Description: No description for PF06390.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [136-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETEPETAPTT EPETEPEDER GPRGATFNQS LTQRLHALKL QSADASPRRA QPTTQEPESA  60
   61 SEGEEPQREP LDEDPRDPEE SEERREANRQ PRRCKTRRPA RRRDQSPESP PRKGPIPIRR 120
  121 H

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.04
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle