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View Structure Prediction Details

Protein: OSR1_RAT
Organism: Rattus norvegicus
Length: 266 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OSR1_RAT.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
286.0 [0..17] [265..2561]
gi|109504984 - gi|109504984|ref|XP_225349.4| PREDICTED: similar to zinc finger protein 192 [Rattus norvegicus]
272.0 [0..22] [265..322]
gi|68365042 - gi|68365042|ref|XP_690837.1| PREDICTED: similar to zinc finger protein 135 (clone pHZ-17) [Danio rer...
269.0 [0..14] [265..60]
gi|76623593 - gi|76623593|ref|XP_602577.2| PREDICTED: similar to zinc finger protein 300-B [Bos taurus]
262.0 [0..22] [265..404]

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Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSKTLPAPV PIHPSLQLTN YSFLQAVNGL PTVPSDHLPN LYGFSALHAV HLHQWTLGYP  60
   61 AMHLPRSSFS KVPGAVSSLM DARFQLPAFP WFPHVIHPKP EITAGGSGAA LKTKPRFDFA 120
  121 NLALAATQED PTKLGRGEGP GSPAGGLGAL LDVTKLSPEK KPTRGRLPSK T

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [172-266]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKEFVCKFCG RHFTKSYNLL IHERTHTDER PYTCDICHKA FRRQDHLRDH RYIHSKEKPF  60
   61 KCQECGKGFC QSRTLAVHKT LHSQVKELKT SKIKC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.69897
Match: 2ee8A
Description: No description for 2ee8A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle