YRC Public Data Repository - Protein Structure Prediction

Protein:	ENSA_RAT
Organism:	Rattus norvegicus
Length:	121 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENSA_RAT.

Description	E-value	Query Range	Subject Range
gi\|109016435 - gi\|109016435\|ref\|XP_001106271.1\| PREDICTED: similar to endosulfine alpha isoform 6 [Macaca mulatta]	191.0	[0..19]	[121..62]
gi\|76649484 - gi\|76649484\|ref\|XP_875557.1\| PREDICTED: similar to cAMP-regulated phosphoprotein 19 (ARPP-19) [Bos t...	191.0	[0..3]	[117..273]
gi\|55959016 - gi\|55959016\|emb\|CAI15508.1\| endosulfine alpha [Homo sapiens]	187.0	[0..1]	[117..1]
gi\|114559307 - gi\|114559307\|ref\|XP_001169440.1\| PREDICTED: endosulfine alpha isoform 2 [Pan troglodytes]	174.0	[0..1]	[121..1]
gi\|60832472 - gi\|60832472\|gb\|AAX37012.1\| endosulfine alpha [synthetic construct]	173.0	[0..1]	[121..1]

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Predicted Domain #1

Region A:
Residues: [1-121]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQKQEEENP AEETGEEKQD TQEKEGILPE KAEEAKLKAK YPSLGQKPGG SDFLMKRLQK  60
   61 GQKYFDSGDY NMAKAKMKNK QLPSAGADKN LVTGDHIPTP QDLPQRKSSL VTSKLAGGQV 120
  121 E

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	54.958607
Match:	PF04667.8
Description:	No description for PF04667.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits