| Protein: | RS4X_RAT |
| Organism: | Rattus norvegicus |
| Length: | 263 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RS4X_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
506.0 | [0..1] | [263..1] |
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506.0 | [0..1] | [263..1] |
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506.0 | [0..1] | [263..1] |
|
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506.0 | [0..1] | [263..1] |
|
|
506.0 | [0..1] | [263..1] |
|
|
505.0 | [0..1] | [263..1] |
|
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504.0 | [0..1] | [263..1] |
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504.0 | [0..1] | [263..1] |
|
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504.0 | [0..1] | [263..1] |
|
Region A: Residues: [1-67] |
1 11 21 31 41 51
| | | | | |
1 MARGPKKHLK RVAAPKHWML DKLTGVFAPR PSTGPHKLRE CLPLIIFLRN RLKYALTGDE 60
61 VKKICMQ
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.684 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.490 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.472 | N/A | N/A | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.465 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.464 | N/A | N/A | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.458 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.456 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.402 | N/A | N/A | a.28.1 | ACP-like |
| View | Download | 0.400 | N/A | N/A | d.58.49 | YajQ-like |
|
Region A: Residues: [68-177] |
1 11 21 31 41 51
| | | | | |
1 RFIKIDGKVR TDITYPAGFM DVISIDKTGE NFRLIYDTKG RFAVHRITPE EAKYKLCKVR 60
61 KIFVGTKGIP HLVTHDARTI RYPDPLIKVN DTIQIDLETG KITDFIKFDT
|
| Detection Method: | |
| Confidence: | 43.920819 |
| Match: | PF00900.11 |
| Description: | No description for PF00900.11 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.809 | N/A | N/A | b.64.1 | Mannose 6-phosphate receptor domain |
| View | Download | 0.783 | N/A | N/A | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.657 | N/A | N/A | c.30.1 | PreATP-grasp domain |
| View | Download | 0.632 | N/A | N/A | b.61.7 | Description not found. |
| View | Download | 0.630 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.555 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.540 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.499 | N/A | N/A | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.499 | N/A | N/A | b.18.1 | Galactose-binding domain-like |
| View | Download | 0.483 | N/A | N/A | b.61.2 | Metalloprotease inhibitor |
|
Region A: Residues: [178-263] |
1 11 21 31 41 51
| | | | | |
1 GNLCMVTGGA NLGRIGVITN RERHPGSFDV VHVKDANGNS FATRLSNIFV IGKGNKPWIS 60
61 LPRGKGIRLT IAEERDKRLA AKQSSG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.608 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.430 | N/A | N/A | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.421 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.407 | N/A | N/A | b.2.2 | Carbohydrate-binding domain |
| View | Download | 0.395 | N/A | N/A | d.141.1 | Ribosomal protein L6 |
