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View Structure Prediction Details

Protein: LAC2_RAT
Organism: Rattus norvegicus
Length: 104 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LAC2_RAT.

Description E-value Query
Range
Subject
Range
gi|106661, gi|33706 - gi|33706|emb|CAA40942.1| immunoglobulin lambda light chain [Homo sapiens], gi|106661|pir||S25740 Ig ...
136.0 [0..1] [103..86]
gi|1929920 - gi|1929920|gb|AAB51477.1| anti-idiotype immunoglobulin M light chain [Rattus norvegicus]
135.0 [0..1] [104..131]
gi|111185614 - gi|111185614|gb|AAI19451.1| Igl-V1 protein [Mus musculus]
134.0 [0..1] [103..130]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPKSTPTLTV FPPSTEELQG NKATLVCLIS DFYPSDVEVA WKANGAPISQ GVDTANPTKQ  60
   61 GNKYIASSFL RLTAEQWRSR NSFTCQVTHE GNTVEKSLSP AECV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.522879
Match: 7fabL
Description: Immunoglobulin light chain lambda variable domain, VL-lambda; Immunoglobulin light chain lambda constant domain, CL-lambda
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle