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View Structure Prediction Details

Protein: ANFB_RAT
Organism: Rattus norvegicus
Length: 121 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ANFB_RAT.

Description E-value Query
Range
Subject
Range
gi|47847117 - gi|47847117|dbj|BAD21299.1| atrial natriuretic peptide [Camelus dromedarius]
119.0 [0..4] [119..1]
ANF_RAT - Natriuretic peptides A OS=Rattus norvegicus GN=Nppa PE=1 SV=1
117.0 [0..4] [119..1]
gi|108246 - pir||S13107 atrial natriuretic peptide precursor - pig
ANF_PIG - Natriuretic peptides A OS=Sus scrofa GN=NPPA PE=1 SV=1
116.0 [0..4] [119..1]
gi|18254389 - gi|18254389|gb|AAL66741.1|AF460238_1 atrial natriuretic peptide hormone [Notomys alexis]
114.0 [0..4] [119..1]
gi|6687599, gi|6... - gi|6687599|emb|CAB65023.1| atrial natriuretic peptide [Balaenoptera physalus], gi|6686952|emb|CAB647...
114.0 [0..4] [119..1]
ANF_MOUSE - Natriuretic peptides A OS=Mus musculus GN=Nppa PE=1 SV=2
114.0 [0..4] [119..1]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLQKVLPQM ILLLLFLNLS PLGGHSHPLG SPSQSPEQST MQKLLELIRE KSEEMAQRQL  60
   61 SKDQGPTKEL LKRVLRSQDS AFRIQERLRN SKMAHSSSCF GQKIDRIGAV SRLGCDGLRL 120
  121 F

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 28.080922
Match: PF00212.9
Description: No description for PF00212.9 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.456 N/A N/A a.142.1 PTS-regulatory domain, PRD
View Download 0.456 N/A N/A a.142.1 PTS-regulatory domain, PRD
View Download 0.428 N/A N/A a.29.13 Description not found.
View Download 0.421 N/A N/A a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.421 N/A N/A a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.307 N/A N/A a.79.1 Antitermination factor NusB
View Download 0.299 N/A N/A c.2.1 NAD(P)-binding Rossmann-fold domains
View Download 0.297 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.237 N/A N/A a.25.1 Ferritin-like
View Download 0.234 N/A N/A a.24.3 Cytochromes


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle