| Protein: | gi|125535897 |
| Organism: | Oryza sativa Indica Group |
| Length: | 340 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125535897.
| Description | E-value | Query Range |
Subject Range |
|
|
263.0 | [0..1] | [303..1] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MDTDGRLRRA LAAFGGGADV WDLVDAALAS AARDRPAELR ARRDGIVERL YATAAGGRCG 60
61 NCDAPRSAEP EAAAAAAASP ASPDEDADVD GL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [93-340] |
1 11 21 31 41 51
| | | | | |
1 DDDEGGGMES KILAIRDFLE DPDQSEDELV SLLQSLADMD ITYKALQETD IGRHVNGLRK 60
61 HPSGEVRQLV KLLVRKWKEI VDDWVRLHNS GGDGGSSVLT DGDSPDKIQG RSYQNAQVSD 120
121 FKYSPSPQRH NGLSSERSSN NNGVESMIEK RRTSPAPTYH NNKQNNSIGY STTSSSAPVR 180
181 TVREQKDNLM DLEKLDSARK RLQENYQEAQ NAKKQRTIQV MDIHDIPKPK NRNAFIRKGG 240
241 GGLPGKHR
|
| Detection Method: | |
| Confidence: | 29.69897 |
| Match: | 1pqvS |
| Description: | RNA polymerase II-TFIIS complex |
Matching Structure (courtesy of the PDB): |
|
