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View Structure Prediction Details

Protein: gi|114670502, gi...
Organism: Pan troglodytes
Length: 308 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114670502, gi....

Description E-value Query
Range
Subject
Range
gi|20086427 - gi|20086427|gb|AAM10497.1|AF087869_1 HCNGP [Homo sapiens]
0.0 [1..308] [1..308]
gi|109118228 - gi|109118228|ref|XP_001098903.1| PREDICTED: similar to transcriptional regulator protein isoform 2 [...
0.0 [1..308] [1..308]
gi|34875136, gi|... - gi|34875136|ref|XP_340939.1| PREDICTED: similar to transcriptional regulator protein [Rattus norvegi...
0.0 [1..308] [1..308]
S30BP_MOUSE - SAP30-binding protein OS=Mus musculus GN=Sap30bp PE=1 SV=2
0.0 [1..308] [1..308]
gi|73964890 - gi|73964890|ref|XP_849471.1| PREDICTED: similar to transcriptional regulator protein isoform 2 [Cani...
0.0 [1..308] [1..308]
gi|114670506 - gi|114670506|ref|XP_001145390.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
gi|21754486, gi|... - gi|21754486|dbj|BAC04514.1| unnamed protein product [Homo sapiens], gi|119609706|gb|EAW89300.1| SAP3...
0.0 [1..308] [1..292]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGKKNVLSS LAVYAEDSEP ESDGEAGIEA VGSAAEEKGG LVSDAYGEDD FSRLGGDEDG  60
   61 YEEEEDENSR QSEDDDSETE KPEADDPKDN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEAEKRDPQE LVASFSERVR NMSPDEIKIP PEPPGRCSNH LQDKIQKLYE RKIKEGMDMN  60
   61 YIIQRKKEFR NPSIYEKLIQ FCAIDELGTN YPKDMFDPHG WSEDSYYEAL AKAQKIEMDK 120
  121 LEKAKKERTK IEFVTGTKKG TTTNATS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 61.522879
Match: PF07818.4
Description: No description for PF07818.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [238-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTTTTASTAV ADAQKRKSKW DSAIPVTTIA QPTILTTTAT LPAVVTVTTS ASGSKTTVIS  60
   61 AVGTIVKKAK Q

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle