YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|123984437, gi...
Organism: synthetic construct
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123984437, gi....

Description E-value Query
Range
Subject
Range
gi|114577255, gi... - gi|114577257|ref|XP_001148023.1| PREDICTED: phosphatidylinositol glycan, class F isoform 3 [Pan trog...
3.0E-81 [1..219] [1..219]
gi|109102846 - gi|109102846|ref|XP_001113130.1| PREDICTED: similar to phosphatidylinositol glycan, class F isoform ...
2.0E-80 [1..219] [1..219]
gi|74222740, gi|... - gi|74222740|dbj|BAE42236.1| unnamed protein product [Mus musculus], gi|22135636|gb|AAH28862.1| Phosp...
7.0E-80 [1..219] [1..219]
gi|73969534 - gi|73969534|ref|XP_531809.2| PREDICTED: similar to phosphatidylinositol glycan, class F isoform 1 is...
5.0E-78 [1..219] [1..219]
gi|45387713, gi|... - gi|45387713|ref|NP_991208.1| phosphatidylinositol glycan anchor biosynthesis, class F [Danio rerio],...
3.0E-73 [1..217] [1..217]
gi|116004365, gi... - gi|83405738|gb|AAI11282.1| Phosphatidylinositol glycan anchor biosynthesis, class F [Bos taurus], gi...
5.0E-73 [1..219] [1..219]
gi|27894291, gi|... - gi|27894291|ref|NP_775097.1| phosphatidylinositol glycan anchor biosynthesis, class F isoform 2 [Hom...
2.0E-66 [1..182] [1..182]

Back

Predicted Domain #1
Region A:
Residues: [1-62]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDNDIKRLL YTHLLCIFSI ILSVFIPSLF LENFSILETH LTWLCICSGF VTAVNLVLYL  60
   61 VV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [63-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPNTSSKRSS LSHKVTGFLK CCIYFLMSCF SFHVIFVLYG APLIELALET FLFAVILSTF  60
   61 TTVPCLCLLG PNLKAWLRVF SRNGVTSIWE NSLQITTISS FVGAWLGALP IPLDWERPWQ 120
  121 VWPISCTLGA TFGYVAGLVI SPLWIYWNRK QLTYKNN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle