YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|114595356, gi...
Organism: Pan troglodytes
Length: 124 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114595356, gi....

Description E-value Query
Range		 Subject
Range
gi|149701755 - gi|149701755|ref|XP_001496955.1| PREDICTED: hypothetical protein [Equus caballus]
LTOR3_BOVIN - Ragulator complex protein LAMTOR3 OS=Bos taurus GN=LAMTOR3 PE=2 SV=1
gi|57109160, gi|... - gi|74002016|ref|XP_862390.1| PREDICTED: similar to mitogen-activated protein kinase kinase 1 interac...
 213.0 [0..1] [124..1]
LTOR3_CHICK - Ragulator complex protein LAMTOR3 OS=Gallus gallus GN=LAMTOR3 PE=2 SV=1
LTOR3_TAEGU - Ragulator complex protein LAMTOR3 OS=Taeniopygia guttata GN=LAMTOR3 PE=2 SV=1
 212.0 [0..1] [124..1]
LTOR3_PONAB - Ragulator complex protein LAMTOR3 OS=Pongo abelii GN=LAMTOR3 PE=2 SV=1
MK1I1_PONPY - Mitogen-activated protein kinase kinase 1-interacting protein 1 - Pongo pygmaeus (Orangutan)
 209.0 [0..1] [124..1]
gi|11493534 - gi|11493534|gb|AAG35540.1|AF130117_74 PRO2783 [Homo sapiens]
 209.0 [0..1] [124..1]
LTOR3_RAT - Ragulator complex protein LAMTOR3 OS=Rattus norvegicus GN=Lamtor3 PE=2 SV=1
 207.0 [0..1] [124..1]
LTOR3_PAGMA - Ragulator complex protein LAMTOR3 OS=Pagrus major GN=lamtor3 PE=2 SV=1
 206.0 [0..1] [124..1]
LTOR3_MOUSE - Ragulator complex protein LAMTOR3 OS=Mus musculus GN=Lamtor3 PE=1 SV=1
 205.0 [0..1] [124..1]

Back

Predicted Domain #1
Region A:
Residues: [1-124] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADDLKRFLY KKLPSVEGLH AIVVSDRDGV PVIKVANDNA PEHALRPGFL STFALATDQG  60
   61 SKLGLSKNKS IICYYNTYQV VQFNRLPLVV SFIASSSANT GLIVSLEKEL APLFEELRQV 120
  121 VEVS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.69897
Match: 1skoA
Description: MP1-p14 Complex
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle